Strain Fitness in Variovorax sp. SCN45 around GFF7188

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
3,826	+		GFF7186	0.40	-0.4
3,885	-		GFF7186	0.48	-0.4
3,917	+		GFF7186	0.52	-0.1
4,007	+		GFF7186	0.65	+1.1
4,008	-		GFF7186	0.65	-1.3
4,011	+		GFF7186	0.65	-1.0
4,085	+		GFF7186	0.76	-1.1
4,152	-		GFF7186	0.85	+0.2
4,165	-		GFF7186	0.87	-0.2
4,253	-				-0.6
4,321	+				+1.2
4,322	-				-0.1
4,322	-				-0.5
4,633	+				-0.8
4,633	+				-0.7
4,677	+				-0.2
4,677	+				+0.5
4,678	-				-0.7
4,678	-				-0.3
4,899	+		GFF7188	0.24	-0.7
4,900	-		GFF7188	0.24	-0.1
5,149	-		GFF7188	0.51	-0.7
5,149	-		GFF7188	0.51	-1.1
5,611	+				-0.4
5,611	+				-0.6
5,612	-				-0.0
5,612	-				+0.5
5,617	+				-0.3
5,617	+				+1.5
5,617	+				-0.7
5,617	+				+0.2
5,838	+				-0.5
5,917	+				-0.6
6,023	+				-0.3
6,023	+				+0.9
6,024	-				+0.4
6,350	+		GFF7189	0.26	+0.2