Strain Fitness in Variovorax sp. SCN45 around GFF5935

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
151,313	+		GFF5934	0.73	+0.1
151,433	+		GFF5934	0.78	-0.4
151,433	+		GFF5934	0.78	-0.1
151,433	+		GFF5934	0.78	+0.4
151,433	+		GFF5934	0.78	-0.4
151,434	-		GFF5934	0.78	+0.1
152,242	+				-1.0
152,578	+		GFF5935	0.23	-0.8
152,578	+		GFF5935	0.23	-0.2
152,578	+		GFF5935	0.23	-0.5
152,579	-		GFF5935	0.23	-0.5
152,770	+		GFF5935	0.31	-0.4
152,987	-		GFF5935	0.40	-0.7
153,433	+		GFF5935	0.59	-0.4
153,434	-		GFF5935	0.59	-1.2
153,886	+		GFF5935	0.78	-1.2
153,886	+		GFF5935	0.78	-0.7
153,886	+		GFF5935	0.78	-0.2
153,886	+		GFF5935	0.78	+0.2
153,887	-		GFF5935	0.78	+0.6
153,887	-		GFF5935	0.78	-0.6
154,132	+		GFF5935	0.89	+0.2
154,133	-		GFF5935	0.89	-0.3
154,629	-				+0.6
154,728	-		GFF5936	0.11	+0.2
155,156	+		GFF5936	0.27	-1.2