Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4123 and GFF4124 are separated by 696 nucleotides GFF4124 and GFF4125 are separated by 407 nucleotides
GFF4123 - no description, at 25,819 to 26,691
GFF4123
GFF4124 - no description, at 27,388 to 27,582
GFF4124
GFF4125 - DNA-binding transcriptional regulator, MocR family / aminotransferase domain, at 27,990 to 29,465
GFF4125
Position (kb) 27
28 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 26.388 kb on - strand, within GFF4123 at 26.483 kb on + strand, within GFF4123 at 26.483 kb on + strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.484 kb on - strand, within GFF4123 at 26.615 kb on + strand at 26.615 kb on + strand at 26.616 kb on - strand at 26.616 kb on - strand at 26.616 kb on - strand at 26.658 kb on + strand at 26.659 kb on - strand at 26.690 kb on - strand at 26.824 kb on + strand at 26.824 kb on + strand at 26.825 kb on - strand at 26.825 kb on - strand at 26.825 kb on - strand at 26.825 kb on - strand at 26.825 kb on - strand at 26.825 kb on - strand at 26.868 kb on + strand at 26.868 kb on + strand at 26.869 kb on - strand at 26.891 kb on + strand at 27.036 kb on + strand at 27.037 kb on - strand at 27.037 kb on - strand at 27.040 kb on + strand at 27.040 kb on + strand at 27.041 kb on - strand at 27.041 kb on - strand at 27.041 kb on - strand at 27.041 kb on - strand at 27.041 kb on - strand at 27.131 kb on + strand at 27.131 kb on + strand at 27.365 kb on + strand at 27.365 kb on + strand at 27.365 kb on + strand at 27.366 kb on - strand at 27.487 kb on - strand, within GFF4124 at 27.487 kb on - strand, within GFF4124 at 27.487 kb on - strand, within GFF4124 at 27.496 kb on + strand, within GFF4124 at 27.496 kb on + strand, within GFF4124 at 27.497 kb on - strand, within GFF4124 at 27.497 kb on - strand, within GFF4124 at 27.497 kb on - strand, within GFF4124 at 27.542 kb on + strand, within GFF4124 at 27.543 kb on - strand, within GFF4124 at 27.563 kb on + strand at 27.563 kb on + strand at 27.563 kb on + strand at 27.564 kb on - strand at 27.598 kb on - strand at 27.636 kb on + strand at 27.640 kb on - strand at 27.676 kb on + strand at 27.680 kb on + strand at 27.684 kb on + strand at 27.713 kb on + strand at 27.770 kb on + strand at 27.771 kb on - strand at 27.857 kb on - strand at 27.857 kb on - strand at 27.857 kb on - strand at 27.860 kb on + strand at 27.860 kb on + strand at 27.860 kb on + strand at 27.860 kb on + strand at 27.939 kb on + strand at 27.939 kb on + strand at 27.939 kb on + strand at 27.940 kb on - strand at 27.940 kb on - strand at 27.972 kb on + strand at 27.999 kb on + strand at 28.049 kb on - strand at 28.049 kb on - strand at 28.100 kb on + strand at 28.101 kb on - strand at 28.129 kb on - strand at 28.129 kb on - strand at 28.129 kb on - strand at 28.131 kb on + strand at 28.132 kb on - strand at 28.179 kb on + strand, within GFF4125 at 28.444 kb on + strand, within GFF4125
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 26,388 - GFF4123 0.65 +1.3 26,483 + GFF4123 0.76 +1.0 26,483 + GFF4123 0.76 +0.3 26,484 - GFF4123 0.76 -1.5 26,484 - GFF4123 0.76 -0.5 26,484 - GFF4123 0.76 -1.8 26,484 - GFF4123 0.76 +0.2 26,484 - GFF4123 0.76 -0.2 26,484 - GFF4123 0.76 -2.3 26,484 - GFF4123 0.76 -0.7 26,615 + +0.9 26,615 + -2.9 26,616 - +0.3 26,616 - -1.2 26,616 - -0.1 26,658 + -0.4 26,659 - +0.0 26,690 - -0.5 26,824 + +0.4 26,824 + -1.0 26,825 - -0.9 26,825 - -0.3 26,825 - +0.5 26,825 - -0.9 26,825 - -0.4 26,825 - +0.2 26,868 + +0.5 26,868 + -0.5 26,869 - -2.0 26,891 + -0.0 27,036 + -0.8 27,037 - -1.1 27,037 - -0.4 27,040 + -0.0 27,040 + -0.4 27,041 - +0.0 27,041 - +0.8 27,041 - -0.1 27,041 - +1.2 27,041 - -0.6 27,131 + -1.3 27,131 + -0.8 27,365 + +0.2 27,365 + -1.0 27,365 + +0.9 27,366 - -0.2 27,487 - GFF4124 0.51 +0.8 27,487 - GFF4124 0.51 -0.2 27,487 - GFF4124 0.51 -0.1 27,496 + GFF4124 0.55 +0.3 27,496 + GFF4124 0.55 -1.6 27,497 - GFF4124 0.56 -1.1 27,497 - GFF4124 0.56 -0.2 27,497 - GFF4124 0.56 -1.3 27,542 + GFF4124 0.79 -0.7 27,543 - GFF4124 0.79 -1.0 27,563 + +0.6 27,563 + +0.8 27,563 + +0.2 27,564 - -0.2 27,598 - -0.3 27,636 + -0.3 27,640 - -1.0 27,676 + -0.6 27,680 + +0.2 27,684 + -0.8 27,713 + -0.7 27,770 + +0.2 27,771 - -0.7 27,857 - +0.3 27,857 - +2.1 27,857 - +0.6 27,860 + -0.9 27,860 + -0.4 27,860 + -1.4 27,860 + -1.0 27,939 + -0.8 27,939 + -1.6 27,939 + -1.9 27,940 - -0.1 27,940 - -0.5 27,972 + +0.6 27,999 + -1.0 28,049 - +0.3 28,049 - -0.7 28,100 + +1.2 28,101 - -0.3 28,129 - -1.5 28,129 - -1.0 28,129 - +0.9 28,131 + +0.0 28,132 - +0.1 28,179 + GFF4125 0.13 -0.4 28,444 + GFF4125 0.31 -1.4
Or see this region's nucleotide sequence