Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4054 and GFF4055 are separated by 89 nucleotides GFF4055 and GFF4056 are separated by 423 nucleotides GFF4056 and GFF4057 overlap by 4 nucleotides
GFF4054 - no description, at 265,671 to 265,964
GFF4054
GFF4055 - hypothetical protein, at 266,054 to 266,359
GFF4055
GFF4056 - Copper/silver efflux RND transporter, transmembrane protein CusA, at 266,783 to 269,947
GFF4056
GFF4057 - Copper/silver efflux RND transporter, membrane fusion protein CusB, at 269,944 to 271,647
GFF4057
Position (kb) 266
267
268
269
270 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 265.943 kb on + strand at 265.944 kb on - strand at 265.947 kb on + strand at 265.991 kb on + strand at 266.853 kb on + strand at 267.108 kb on + strand, within GFF4056 at 267.187 kb on + strand, within GFF4056 at 267.189 kb on + strand, within GFF4056 at 267.189 kb on + strand, within GFF4056 at 267.189 kb on + strand, within GFF4056 at 267.189 kb on + strand, within GFF4056 at 267.201 kb on + strand, within GFF4056 at 267.285 kb on + strand, within GFF4056 at 267.285 kb on + strand, within GFF4056 at 267.780 kb on + strand, within GFF4056 at 268.234 kb on - strand, within GFF4056 at 268.234 kb on - strand, within GFF4056 at 268.374 kb on + strand, within GFF4056 at 268.375 kb on - strand, within GFF4056 at 268.974 kb on + strand, within GFF4056 at 269.263 kb on - strand, within GFF4056 at 269.263 kb on - strand, within GFF4056 at 269.529 kb on + strand, within GFF4056 at 269.530 kb on - strand, within GFF4056 at 269.530 kb on - strand, within GFF4056 at 269.667 kb on + strand at 269.667 kb on + strand at 269.668 kb on - strand at 269.694 kb on + strand at 269.790 kb on + strand at 269.863 kb on - strand at 269.863 kb on - strand at 270.271 kb on - strand, within GFF4057
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 265,943 + +0.9 265,944 - -2.1 265,947 + +0.3 265,991 + -1.2 266,853 + -0.5 267,108 + GFF4056 0.10 -0.4 267,187 + GFF4056 0.13 +1.1 267,189 + GFF4056 0.13 -1.8 267,189 + GFF4056 0.13 -1.1 267,189 + GFF4056 0.13 +0.6 267,189 + GFF4056 0.13 +0.9 267,201 + GFF4056 0.13 +0.2 267,285 + GFF4056 0.16 -0.5 267,285 + GFF4056 0.16 -0.3 267,780 + GFF4056 0.32 -0.1 268,234 - GFF4056 0.46 -2.8 268,234 - GFF4056 0.46 +0.3 268,374 + GFF4056 0.50 -0.8 268,375 - GFF4056 0.50 -0.5 268,974 + GFF4056 0.69 +1.5 269,263 - GFF4056 0.78 +0.9 269,263 - GFF4056 0.78 -0.4 269,529 + GFF4056 0.87 +0.2 269,530 - GFF4056 0.87 -1.2 269,530 - GFF4056 0.87 +0.5 269,667 + +0.1 269,667 + -0.4 269,668 - +0.3 269,694 + -0.5 269,790 + +0.2 269,863 - -1.2 269,863 - -1.7 270,271 - GFF4057 0.19 -1.7
Or see this region's nucleotide sequence