Strain Fitness in Variovorax sp. SCN45 around GFF2715

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
148,115	+		GFF2714	0.45	-0.1
148,116	-		GFF2714	0.46	+0.2
148,116	-		GFF2714	0.46	-0.8
148,116	-		GFF2714	0.46	-1.1
148,389	-		GFF2714	0.72	-0.9
148,389	-		GFF2714	0.72	-1.0
148,524	-		GFF2714	0.85	-0.0
148,524	-		GFF2714	0.85	-0.4
148,818	+				+0.9
149,262	+		GFF2715	0.47	-0.2
149,262	+		GFF2715	0.47	-1.8
149,262	+		GFF2715	0.47	-0.4
149,263	-		GFF2715	0.47	-0.4
149,544	+		GFF2715	0.76	-0.1
149,544	+		GFF2715	0.76	-1.3
149,544	+		GFF2715	0.76	+0.2
149,545	-		GFF2715	0.76	+0.8
150,023	+		GFF2716	0.25	+0.2
150,023	+		GFF2716	0.25	+0.2
150,024	-		GFF2716	0.25	-0.8
150,024	-		GFF2716	0.25	-1.7
150,024	-		GFF2716	0.25	-0.1
150,026	+		GFF2716	0.25	-0.3
150,414	-		GFF2716	0.66	-0.4
150,414	-		GFF2716	0.66	+0.3
150,729	+				-0.0
150,729	+				-0.7
150,729	+				+1.0
150,762	+				+0.7
150,763	-				+0.7
150,763	-				+0.2