Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2398 and GFF2399 are separated by 1 nucleotides GFF2399 and GFF2400 are separated by 73 nucleotides
GFF2398 - Uncharacterized MFS-type transporter, at 449,506 to 450,933
GFF2398
GFF2399 - TonB-dependent receptor, at 450,935 to 453,469
GFF2399
GFF2400 - no description, at 453,543 to 454,592
GFF2400
Position (kb) 450
451
452
453
454 Strain fitness (log2 ratio) -2
-1
0
1
2 at 450.569 kb on + strand, within GFF2398 at 450.569 kb on + strand, within GFF2398 at 450.570 kb on - strand, within GFF2398 at 451.065 kb on + strand at 451.065 kb on + strand at 451.066 kb on - strand at 451.066 kb on - strand at 451.066 kb on - strand at 451.165 kb on - strand at 451.189 kb on - strand, within GFF2399 at 451.210 kb on - strand, within GFF2399 at 451.491 kb on + strand, within GFF2399 at 451.491 kb on + strand, within GFF2399 at 451.492 kb on - strand, within GFF2399 at 451.539 kb on + strand, within GFF2399 at 451.539 kb on + strand, within GFF2399 at 451.552 kb on - strand, within GFF2399 at 451.552 kb on - strand, within GFF2399 at 451.659 kb on + strand, within GFF2399 at 451.660 kb on - strand, within GFF2399 at 451.687 kb on - strand, within GFF2399 at 451.687 kb on - strand, within GFF2399 at 451.687 kb on - strand, within GFF2399 at 451.704 kb on + strand, within GFF2399 at 451.704 kb on + strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.705 kb on - strand, within GFF2399 at 451.786 kb on - strand, within GFF2399 at 451.984 kb on - strand, within GFF2399 at 452.079 kb on - strand, within GFF2399 at 452.121 kb on + strand, within GFF2399 at 452.206 kb on - strand, within GFF2399 at 452.244 kb on + strand, within GFF2399 at 452.466 kb on + strand, within GFF2399 at 452.466 kb on + strand, within GFF2399 at 452.466 kb on + strand, within GFF2399 at 452.467 kb on - strand, within GFF2399 at 452.541 kb on - strand, within GFF2399 at 452.641 kb on - strand, within GFF2399 at 452.641 kb on - strand, within GFF2399 at 452.641 kb on - strand, within GFF2399 at 452.641 kb on - strand, within GFF2399 at 452.641 kb on - strand, within GFF2399 at 452.641 kb on - strand, within GFF2399 at 452.796 kb on + strand, within GFF2399 at 452.796 kb on + strand, within GFF2399 at 452.797 kb on - strand, within GFF2399 at 452.910 kb on + strand, within GFF2399 at 452.910 kb on + strand, within GFF2399 at 452.911 kb on - strand, within GFF2399 at 453.220 kb on - strand at 453.220 kb on - strand at 453.220 kb on - strand at 453.250 kb on - strand at 453.539 kb on + strand at 453.539 kb on + strand at 453.539 kb on + strand at 453.539 kb on + strand at 453.539 kb on + strand at 453.539 kb on + strand at 453.540 kb on - strand at 453.540 kb on - strand at 453.540 kb on - strand at 453.540 kb on - strand at 453.544 kb on + strand at 453.544 kb on + strand at 453.545 kb on - strand at 453.545 kb on - strand at 453.704 kb on - strand, within GFF2400 at 454.195 kb on + strand, within GFF2400 at 454.195 kb on + strand, within GFF2400 at 454.195 kb on + strand, within GFF2400 at 454.196 kb on - strand, within GFF2400 at 454.223 kb on - strand, within GFF2400
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 450,569 + GFF2398 0.74 -0.7 450,569 + GFF2398 0.74 -1.4 450,570 - GFF2398 0.75 -0.1 451,065 + -2.3 451,065 + -0.0 451,066 - -1.0 451,066 - +0.6 451,066 - -0.3 451,165 - -0.1 451,189 - GFF2399 0.10 -1.4 451,210 - GFF2399 0.11 +0.3 451,491 + GFF2399 0.22 -0.5 451,491 + GFF2399 0.22 -0.3 451,492 - GFF2399 0.22 +0.7 451,539 + GFF2399 0.24 +1.1 451,539 + GFF2399 0.24 -0.9 451,552 - GFF2399 0.24 -0.7 451,552 - GFF2399 0.24 -0.4 451,659 + GFF2399 0.29 -2.3 451,660 - GFF2399 0.29 +0.9 451,687 - GFF2399 0.30 -0.1 451,687 - GFF2399 0.30 -2.0 451,687 - GFF2399 0.30 -1.4 451,704 + GFF2399 0.30 +0.3 451,704 + GFF2399 0.30 +0.3 451,705 - GFF2399 0.30 -0.6 451,705 - GFF2399 0.30 -0.3 451,705 - GFF2399 0.30 -0.3 451,705 - GFF2399 0.30 -0.4 451,705 - GFF2399 0.30 -0.1 451,705 - GFF2399 0.30 -0.1 451,705 - GFF2399 0.30 -0.9 451,705 - GFF2399 0.30 +0.3 451,705 - GFF2399 0.30 -1.3 451,786 - GFF2399 0.34 -0.4 451,984 - GFF2399 0.41 +0.1 452,079 - GFF2399 0.45 -0.4 452,121 + GFF2399 0.47 -0.6 452,206 - GFF2399 0.50 -0.9 452,244 + GFF2399 0.52 -0.9 452,466 + GFF2399 0.60 +0.6 452,466 + GFF2399 0.60 +0.3 452,466 + GFF2399 0.60 -0.1 452,467 - GFF2399 0.60 -1.1 452,541 - GFF2399 0.63 -1.1 452,641 - GFF2399 0.67 -0.9 452,641 - GFF2399 0.67 -0.3 452,641 - GFF2399 0.67 -0.2 452,641 - GFF2399 0.67 -0.2 452,641 - GFF2399 0.67 +0.0 452,641 - GFF2399 0.67 -1.8 452,796 + GFF2399 0.73 +0.2 452,796 + GFF2399 0.73 +1.5 452,797 - GFF2399 0.73 +0.3 452,910 + GFF2399 0.78 +0.2 452,910 + GFF2399 0.78 -0.3 452,911 - GFF2399 0.78 +0.0 453,220 - +0.2 453,220 - -0.5 453,220 - -2.5 453,250 - +0.5 453,539 + -0.7 453,539 + +0.2 453,539 + +0.2 453,539 + -0.7 453,539 + -0.6 453,539 + -1.2 453,540 - +0.2 453,540 - -0.8 453,540 - +1.3 453,540 - +1.9 453,544 + -0.2 453,544 + -0.1 453,545 - -1.2 453,545 - -1.8 453,704 - GFF2400 0.15 -0.2 454,195 + GFF2400 0.62 -0.1 454,195 + GFF2400 0.62 +1.1 454,195 + GFF2400 0.62 -0.5 454,196 - GFF2400 0.62 -1.9 454,223 - GFF2400 0.65 -0.7
Or see this region's nucleotide sequence