Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF170 and GFF171 are separated by 73 nucleotides GFF171 and GFF172 are separated by 74 nucleotides
GFF170 - Two-component system sensor histidine kinase/response regulator hybrid, at 200,649 to 201,872
GFF170
GFF171 - Histidine kinase, at 201,946 to 202,305
GFF171
GFF172 - hypothetical protein, at 202,380 to 204,242
GFF172
Position (kb) 201
202
203 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 200.946 kb on + strand, within GFF170 at 200.947 kb on - strand, within GFF170 at 201.149 kb on + strand, within GFF170 at 201.149 kb on + strand, within GFF170 at 201.149 kb on + strand, within GFF170 at 201.149 kb on + strand, within GFF170 at 201.150 kb on - strand, within GFF170 at 201.210 kb on + strand, within GFF170 at 201.211 kb on - strand, within GFF170 at 201.211 kb on - strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.735 kb on + strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.736 kb on - strand, within GFF170 at 201.773 kb on + strand at 201.773 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.870 kb on + strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.871 kb on - strand at 201.882 kb on + strand at 201.882 kb on + strand at 201.883 kb on - strand at 201.927 kb on - strand at 201.927 kb on - strand at 202.032 kb on + strand, within GFF171 at 202.032 kb on + strand, within GFF171 at 202.033 kb on - strand, within GFF171 at 202.033 kb on - strand, within GFF171 at 202.033 kb on - strand, within GFF171 at 202.033 kb on - strand, within GFF171 at 202.033 kb on - strand, within GFF171 at 202.033 kb on - strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.036 kb on + strand, within GFF171 at 202.037 kb on - strand, within GFF171 at 202.037 kb on - strand, within GFF171 at 202.037 kb on - strand, within GFF171 at 202.037 kb on - strand, within GFF171 at 202.037 kb on - strand, within GFF171 at 202.384 kb on + strand at 202.384 kb on + strand at 202.385 kb on - strand at 202.420 kb on + strand at 202.420 kb on + strand at 202.420 kb on + strand at 202.420 kb on + strand at 202.420 kb on + strand at 202.421 kb on - strand at 202.421 kb on - strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.450 kb on + strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.451 kb on - strand at 202.501 kb on + strand at 202.501 kb on + strand at 202.501 kb on + strand at 202.501 kb on + strand at 202.502 kb on - strand at 202.502 kb on - strand at 202.502 kb on - strand at 202.502 kb on - strand at 202.966 kb on + strand, within GFF172 at 202.966 kb on + strand, within GFF172 at 202.966 kb on + strand, within GFF172 at 202.966 kb on + strand, within GFF172 at 202.966 kb on + strand, within GFF172 at 202.967 kb on - strand, within GFF172 at 202.967 kb on - strand, within GFF172 at 202.967 kb on - strand, within GFF172 at 202.967 kb on - strand, within GFF172 at 202.967 kb on - strand, within GFF172 at 203.017 kb on + strand, within GFF172 at 203.017 kb on + strand, within GFF172 at 203.017 kb on + strand, within GFF172 at 203.017 kb on + strand, within GFF172 at 203.018 kb on - strand, within GFF172 at 203.018 kb on - strand, within GFF172 at 203.018 kb on - strand, within GFF172 at 203.018 kb on - strand, within GFF172 at 203.018 kb on - strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.257 kb on + strand, within GFF172 at 203.258 kb on - strand, within GFF172 at 203.258 kb on - strand, within GFF172 at 203.258 kb on - strand, within GFF172 at 203.258 kb on - strand, within GFF172 at 203.258 kb on - strand, within GFF172
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 200,946 + GFF170 0.24 +0.1 200,947 - GFF170 0.24 -0.9 201,149 + GFF170 0.41 +0.6 201,149 + GFF170 0.41 +0.2 201,149 + GFF170 0.41 -0.4 201,149 + GFF170 0.41 +2.4 201,150 - GFF170 0.41 +0.3 201,210 + GFF170 0.46 -1.1 201,211 - GFF170 0.46 -0.7 201,211 - GFF170 0.46 -1.1 201,735 + GFF170 0.89 -0.6 201,735 + GFF170 0.89 -0.8 201,735 + GFF170 0.89 +1.3 201,735 + GFF170 0.89 -0.6 201,735 + GFF170 0.89 -0.6 201,735 + GFF170 0.89 -0.1 201,735 + GFF170 0.89 +0.9 201,735 + GFF170 0.89 +0.3 201,735 + GFF170 0.89 +0.6 201,735 + GFF170 0.89 -0.6 201,735 + GFF170 0.89 -0.8 201,735 + GFF170 0.89 -0.5 201,735 + GFF170 0.89 -0.1 201,735 + GFF170 0.89 -1.1 201,736 - GFF170 0.89 +0.1 201,736 - GFF170 0.89 +0.2 201,736 - GFF170 0.89 -1.1 201,736 - GFF170 0.89 +0.5 201,736 - GFF170 0.89 +0.9 201,736 - GFF170 0.89 -0.3 201,736 - GFF170 0.89 -0.2 201,736 - GFF170 0.89 +0.4 201,736 - GFF170 0.89 +0.1 201,736 - GFF170 0.89 -1.9 201,773 + +0.7 201,773 + +0.2 201,870 + +0.6 201,870 + -0.6 201,870 + -1.1 201,870 + -0.4 201,870 + +0.4 201,870 + -1.6 201,870 + +0.3 201,870 + -0.5 201,870 + -0.1 201,870 + -1.1 201,870 + -0.9 201,870 + +1.1 201,870 + +1.0 201,870 + +0.3 201,871 - -0.5 201,871 - -0.1 201,871 - -0.6 201,871 - -1.1 201,871 - +0.1 201,871 - -1.2 201,871 - -0.1 201,871 - -0.3 201,871 - -0.6 201,871 - +0.8 201,882 + -0.0 201,882 + -1.7 201,883 - -2.9 201,927 - -0.1 201,927 - +0.3 202,032 + GFF171 0.24 -0.3 202,032 + GFF171 0.24 +0.0 202,033 - GFF171 0.24 +1.4 202,033 - GFF171 0.24 +0.1 202,033 - GFF171 0.24 -1.4 202,033 - GFF171 0.24 +1.4 202,033 - GFF171 0.24 -0.2 202,033 - GFF171 0.24 -0.3 202,036 + GFF171 0.25 -0.0 202,036 + GFF171 0.25 +0.3 202,036 + GFF171 0.25 -0.9 202,036 + GFF171 0.25 -0.5 202,036 + GFF171 0.25 -0.5 202,036 + GFF171 0.25 -1.5 202,036 + GFF171 0.25 -0.7 202,036 + GFF171 0.25 +0.4 202,036 + GFF171 0.25 +1.4 202,036 + GFF171 0.25 +0.1 202,037 - GFF171 0.25 -2.2 202,037 - GFF171 0.25 -0.2 202,037 - GFF171 0.25 +0.0 202,037 - GFF171 0.25 +1.0 202,037 - GFF171 0.25 +0.2 202,384 + +0.4 202,384 + -0.2 202,385 - +0.6 202,420 + +0.5 202,420 + -0.4 202,420 + -2.0 202,420 + -0.1 202,420 + -0.5 202,421 - -0.6 202,421 - -1.0 202,450 + +0.4 202,450 + +1.4 202,450 + -1.2 202,450 + -1.3 202,450 + -1.2 202,450 + -1.4 202,450 + +0.1 202,450 + +0.9 202,450 + -0.6 202,450 + -1.1 202,450 + +0.0 202,450 + +1.6 202,450 + -0.7 202,450 + +0.7 202,450 + -0.9 202,450 + -0.6 202,450 + +0.0 202,451 - +0.4 202,451 - +0.9 202,451 - -0.3 202,451 - +0.3 202,451 - +0.7 202,451 - -2.4 202,451 - -0.5 202,451 - -0.3 202,451 - +0.9 202,451 - -1.4 202,451 - +0.4 202,451 - +0.2 202,451 - -1.7 202,451 - +0.4 202,451 - +1.4 202,501 + +1.0 202,501 + -0.7 202,501 + -0.5 202,501 + -2.0 202,502 - -2.5 202,502 - +0.4 202,502 - -0.2 202,502 - +0.6 202,966 + GFF172 0.31 -0.1 202,966 + GFF172 0.31 -0.6 202,966 + GFF172 0.31 +1.9 202,966 + GFF172 0.31 -0.1 202,966 + GFF172 0.31 -0.5 202,967 - GFF172 0.32 +1.7 202,967 - GFF172 0.32 -0.6 202,967 - GFF172 0.32 -0.6 202,967 - GFF172 0.32 +0.4 202,967 - GFF172 0.32 -0.6 203,017 + GFF172 0.34 +0.4 203,017 + GFF172 0.34 -0.6 203,017 + GFF172 0.34 -0.5 203,017 + GFF172 0.34 -1.6 203,018 - GFF172 0.34 -0.6 203,018 - GFF172 0.34 -0.6 203,018 - GFF172 0.34 -0.8 203,018 - GFF172 0.34 +0.4 203,018 - GFF172 0.34 +0.2 203,257 + GFF172 0.47 -0.5 203,257 + GFF172 0.47 -1.5 203,257 + GFF172 0.47 -0.6 203,257 + GFF172 0.47 -0.9 203,257 + GFF172 0.47 -0.2 203,257 + GFF172 0.47 +0.4 203,257 + GFF172 0.47 -1.6 203,257 + GFF172 0.47 +0.6 203,257 + GFF172 0.47 +0.2 203,257 + GFF172 0.47 +0.0 203,258 - GFF172 0.47 +0.8 203,258 - GFF172 0.47 +2.0 203,258 - GFF172 0.47 +0.9 203,258 - GFF172 0.47 -1.1 203,258 - GFF172 0.47 -1.4
Or see this region's nucleotide sequence