Strain Fitness in Variovorax sp. SCN45 around GFF1374

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
719,348	+		GFF1372	0.66	+0.1
719,348	+		GFF1372	0.66	-0.9
719,348	+		GFF1372	0.66	-0.3
719,348	+		GFF1372	0.66	-0.5
720,052	+		GFF1373	0.51	-0.4
720,052	+		GFF1373	0.51	-2.4
720,052	+		GFF1373	0.51	-2.9
720,052	+		GFF1373	0.51	+1.1
720,053	-		GFF1373	0.52	+0.3
720,094	+		GFF1373	0.59	+0.2
720,094	+		GFF1373	0.59	-0.4
720,311	-				+0.5
720,514	+		GFF1374	0.15	-2.5
720,767	+		GFF1374	0.36	-0.4
720,833	+		GFF1374	0.41	-1.6
720,833	+		GFF1374	0.41	-0.5
720,833	+		GFF1374	0.41	-0.8
720,833	+		GFF1374	0.41	-0.1
720,833	+		GFF1374	0.41	+0.8
720,834	-		GFF1374	0.41	+0.2
720,834	-		GFF1374	0.41	-0.3
720,834	-		GFF1374	0.41	+0.2
720,868	+		GFF1374	0.44	-1.3
720,889	-		GFF1374	0.45	-0.7
721,701	-				-1.2
721,701	-				-0.2
721,701	-				+0.9
721,736	+				+1.5
721,736	+				-0.3
721,736	+				-0.6
721,736	+				-0.2
721,736	+				-0.7
721,736	+				-0.1
721,737	-				-1.6
721,737	-				-0.4
721,737	-				-0.7
721,739	+				-0.5
721,739	+				+0.1
721,739	+				-0.5
721,739	+				+0.8
721,740	-		GFF1375	0.10	+0.8
721,740	-		GFF1375	0.10	-0.5
721,740	-		GFF1375	0.10	+1.1
721,742	+		GFF1375	0.10	-0.1
721,742	+		GFF1375	0.10	+0.1
721,743	-		GFF1375	0.10	+0.7
721,743	-		GFF1375	0.10	+0.4
721,743	-		GFF1375	0.10	+0.4