Strain Fitness in Variovorax sp. SCN45 around GFF102

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
127,111	-		GFF101	0.52	-0.0
127,152	+		GFF101	0.55	-1.9
127,153	-		GFF101	0.55	-0.4
127,294	-		GFF101	0.66	+0.5
127,294	-		GFF101	0.66	-1.2
127,401	+		GFF101	0.74	+0.2
127,401	+		GFF101	0.74	-1.6
127,401	+		GFF101	0.74	+0.5
127,402	-		GFF101	0.75	-0.5
127,402	-		GFF101	0.75	+0.2
127,402	-		GFF101	0.75	-1.1
127,563	+		GFF101	0.87	+0.3
127,563	+		GFF101	0.87	-0.5
127,563	+		GFF101	0.87	-0.4
127,569	+		GFF101	0.88	-3.3
127,569	+		GFF101	0.88	-1.1
127,569	+		GFF101	0.88	-0.8
127,570	-		GFF101	0.88	-0.2
127,570	-		GFF101	0.88	-0.5
127,570	-		GFF101	0.88	+0.5
127,850	-				+1.0
127,894	-				+0.2
128,561	-		GFF102	0.54	-0.8
128,615	-		GFF102	0.58	-0.3
128,632	-		GFF102	0.60	-0.9
128,734	+		GFF102	0.68	-0.9
129,989	+		GFF103	0.63	-1.5
129,990	-		GFF103	0.63	+1.5
129,990	-		GFF103	0.63	-0.0