Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF847 and GFF848 are separated by 19 nucleotides GFF848 and GFF849 are separated by 143 nucleotides GFF849 and GFF850 are separated by 11 nucleotides GFF850 and GFF851 are separated by 34 nucleotides
GFF847 - Acetyltransferase, at 156,042 to 156,548
GFF847
GFF848 - no description, at 156,568 to 157,011
GFF848
GFF849 - putative carboxylesterase, at 157,155 to 158,909
GFF849
GFF850 - Two-component transcriptional response regulator, LuxR family, at 158,921 to 159,538
GFF850
GFF851 - Two-component system sensor histidine kinase, at 159,573 to 160,619
GFF851
Position (kb) 157
158
159 Strain fitness (log2 ratio) -1
0
1
2 at 156.181 kb on + strand, within GFF847 at 156.182 kb on - strand, within GFF847 at 156.184 kb on + strand, within GFF847 at 156.185 kb on - strand, within GFF847 at 156.615 kb on - strand, within GFF848 at 156.656 kb on + strand, within GFF848 at 156.656 kb on + strand, within GFF848 at 156.657 kb on - strand, within GFF848 at 156.657 kb on - strand, within GFF848 at 156.657 kb on - strand, within GFF848 at 156.657 kb on - strand, within GFF848 at 156.690 kb on + strand, within GFF848 at 156.691 kb on - strand, within GFF848 at 156.768 kb on - strand, within GFF848 at 157.296 kb on + strand at 157.518 kb on + strand, within GFF849 at 157.518 kb on + strand, within GFF849 at 157.620 kb on + strand, within GFF849 at 157.621 kb on - strand, within GFF849 at 157.621 kb on - strand, within GFF849 at 158.048 kb on + strand, within GFF849 at 158.048 kb on + strand, within GFF849 at 158.049 kb on - strand, within GFF849 at 158.244 kb on + strand, within GFF849 at 158.245 kb on - strand, within GFF849 at 158.245 kb on - strand, within GFF849 at 158.367 kb on + strand, within GFF849 at 158.368 kb on - strand, within GFF849 at 158.394 kb on + strand, within GFF849 at 158.395 kb on - strand, within GFF849 at 158.457 kb on + strand, within GFF849 at 158.457 kb on + strand, within GFF849 at 158.469 kb on + strand, within GFF849 at 158.469 kb on + strand, within GFF849 at 158.469 kb on + strand, within GFF849 at 158.469 kb on + strand, within GFF849 at 158.769 kb on + strand at 158.769 kb on + strand at 158.770 kb on - strand at 158.770 kb on - strand at 158.770 kb on - strand at 158.770 kb on - strand at 158.770 kb on - strand at 158.770 kb on - strand at 158.787 kb on + strand at 158.788 kb on - strand at 159.010 kb on + strand, within GFF850 at 159.010 kb on + strand, within GFF850 at 159.010 kb on + strand, within GFF850 at 159.011 kb on - strand, within GFF850 at 159.011 kb on - strand, within GFF850 at 159.252 kb on + strand, within GFF850 at 159.252 kb on + strand, within GFF850 at 159.252 kb on + strand, within GFF850 at 159.253 kb on - strand, within GFF850 at 159.253 kb on - strand, within GFF850 at 159.288 kb on + strand, within GFF850 at 159.304 kb on - strand, within GFF850
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 156,181 + GFF847 0.27 -0.7 156,182 - GFF847 0.28 -0.8 156,184 + GFF847 0.28 +0.6 156,185 - GFF847 0.28 +0.2 156,615 - GFF848 0.11 -0.4 156,656 + GFF848 0.20 -0.8 156,656 + GFF848 0.20 -0.6 156,657 - GFF848 0.20 -0.5 156,657 - GFF848 0.20 -1.2 156,657 - GFF848 0.20 -0.2 156,657 - GFF848 0.20 +1.3 156,690 + GFF848 0.27 -0.0 156,691 - GFF848 0.28 +0.0 156,768 - GFF848 0.45 +1.8 157,296 + +0.8 157,518 + GFF849 0.21 +1.2 157,518 + GFF849 0.21 +0.1 157,620 + GFF849 0.26 +1.1 157,621 - GFF849 0.27 -1.1 157,621 - GFF849 0.27 -0.1 158,048 + GFF849 0.51 +0.6 158,048 + GFF849 0.51 +0.2 158,049 - GFF849 0.51 +0.8 158,244 + GFF849 0.62 -1.0 158,245 - GFF849 0.62 -0.4 158,245 - GFF849 0.62 -0.8 158,367 + GFF849 0.69 +0.7 158,368 - GFF849 0.69 -1.2 158,394 + GFF849 0.71 +0.1 158,395 - GFF849 0.71 -0.2 158,457 + GFF849 0.74 -0.7 158,457 + GFF849 0.74 +0.8 158,469 + GFF849 0.75 -0.2 158,469 + GFF849 0.75 +0.3 158,469 + GFF849 0.75 +0.8 158,469 + GFF849 0.75 +0.1 158,769 + -0.7 158,769 + +0.4 158,770 - -0.1 158,770 - +1.0 158,770 - +1.4 158,770 - +0.1 158,770 - +0.1 158,770 - -0.8 158,787 + -0.9 158,788 - -0.4 159,010 + GFF850 0.14 +1.0 159,010 + GFF850 0.14 -0.3 159,010 + GFF850 0.14 -0.8 159,011 - GFF850 0.15 +1.6 159,011 - GFF850 0.15 -0.1 159,252 + GFF850 0.54 +0.3 159,252 + GFF850 0.54 +0.1 159,252 + GFF850 0.54 -0.8 159,253 - GFF850 0.54 -0.0 159,253 - GFF850 0.54 +1.3 159,288 + GFF850 0.59 -0.1 159,304 - GFF850 0.62 -0.6
Or see this region's nucleotide sequence