Strain Fitness in Variovorax sp. SCN45 around GFF7363

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
9,469	+				+0.4
9,937	+		GFF7362	0.67	-0.2
9,937	+		GFF7362	0.67	-0.1
10,179	+				+1.2
10,179	+				+0.1
10,180	-				-0.8
10,363	-				-0.1
10,367	-				-0.1
10,390	+				+0.0
10,390	+				+0.4
10,390	+				+0.7
10,390	+				-0.2
10,391	-				+0.0
10,391	-				+1.7
10,391	-				-1.3
10,648	+		GFF7363	0.26	-0.1
10,648	+		GFF7363	0.26	-1.0
10,683	+		GFF7363	0.30	+1.0
10,683	+		GFF7363	0.30	-0.4
10,683	+		GFF7363	0.30	-0.5
10,683	+		GFF7363	0.30	-0.0
10,684	-		GFF7363	0.30	-0.2
10,704	+		GFF7363	0.32	-0.0
10,719	+		GFF7363	0.34	-0.8
10,720	-		GFF7363	0.34	-0.3
10,720	-		GFF7363	0.34	+0.3
10,800	+		GFF7363	0.42	-1.2
10,819	-		GFF7363	0.44	+0.2
10,857	+		GFF7363	0.48	+0.2
10,857	+		GFF7363	0.48	+0.2
10,857	+		GFF7363	0.48	-0.3
10,857	+		GFF7363	0.48	-1.8
10,857	+		GFF7363	0.48	+0.0
10,857	+		GFF7363	0.48	-0.6
10,859	+		GFF7363	0.48	+2.0
10,860	-		GFF7363	0.48	+0.8
11,223	+		GFF7363	0.85	+0.2
11,224	-		GFF7363	0.86	-0.4
11,253	+		GFF7363	0.89	-0.8
11,254	-		GFF7363	0.89	-0.5
11,254	-		GFF7363	0.89	-1.0
11,254	-		GFF7363	0.89	-2.6
11,254	-		GFF7363	0.89	+0.3
11,254	-		GFF7363	0.89	+0.2
11,645	-		GFF7364	0.22	+0.0
11,645	-		GFF7364	0.22	-0.3
11,683	+		GFF7364	0.25	-0.8
12,169	+		GFF7364	0.69	-0.4
12,264	+		GFF7364	0.78	-0.8
12,265	-		GFF7364	0.78	+1.6