Strain Fitness in Variovorax sp. SCN45 around GFF7268

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
15,077	+		GFF7267	0.59	+0.3
15,078	-		GFF7267	0.59	+0.1
15,078	-		GFF7267	0.59	+0.2
15,302	+		GFF7267	0.77	+0.2
15,303	-		GFF7267	0.77	+0.0
15,303	-		GFF7267	0.77	+0.1
15,303	-		GFF7267	0.77	-1.8
15,463	+				-0.5
15,539	+				-0.5
15,890	+		GFF7268	0.28	-1.4
16,034	+		GFF7268	0.43	-0.8
16,035	-		GFF7268	0.43	-0.5
16,035	-		GFF7268	0.43	+0.1
16,077	-		GFF7268	0.47	+0.7
16,077	-		GFF7268	0.47	+0.0
16,077	-		GFF7268	0.47	-0.4
16,118	+		GFF7268	0.52	-0.7
16,119	-		GFF7268	0.52	-1.7
16,149	-		GFF7268	0.55	+0.2
16,254	-		GFF7268	0.66	-1.4
16,322	+		GFF7268	0.72	-0.2
16,938	+		GFF7269	0.12	-0.2
16,938	+		GFF7269	0.12	-0.7
16,938	+		GFF7269	0.12	-0.5
16,939	-		GFF7269	0.12	+0.3
16,939	-		GFF7269	0.12	-1.2
17,088	-		GFF7269	0.21	-1.8
17,088	-		GFF7269	0.21	-1.4
17,119	-		GFF7269	0.23	-0.4
17,125	-		GFF7269	0.24	+0.4
17,256	+		GFF7269	0.32	+0.6
17,257	-		GFF7269	0.32	-0.2
17,257	-		GFF7269	0.32	-0.8
17,257	-		GFF7269	0.32	-1.7
17,257	-		GFF7269	0.32	+1.0
17,336	+		GFF7269	0.37	+0.5
17,336	+		GFF7269	0.37	-0.7
17,337	-		GFF7269	0.37	-0.1
17,337	-		GFF7269	0.37	-1.0
17,343	+		GFF7269	0.37	-1.1
17,344	-		GFF7269	0.38	-0.8
17,394	-		GFF7269	0.41	+0.1