Strain Fitness in Variovorax sp. SCN45 around GFF5723

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
91,640	-		GFF5722	0.43	+0.2
91,640	-		GFF5722	0.43	+0.3
92,604	-		GFF5723	0.26	-0.9
92,858	+		GFF5723	0.51	+1.2
92,858	+		GFF5723	0.51	-0.2
92,859	-		GFF5723	0.51	+0.0
92,859	-		GFF5723	0.51	+1.0
92,864	+		GFF5723	0.51	-0.9
93,131	+		GFF5723	0.78	-0.3
93,132	-		GFF5723	0.78	-0.6
93,132	-		GFF5723	0.78	+0.1
93,177	-		GFF5723	0.82	-0.5
93,185	+		GFF5723	0.83	-0.6
93,186	-		GFF5723	0.83	+0.0
93,300	-				-0.8
93,317	+				-0.0
93,980	-				+1.0
94,031	+				-0.6
94,258	-		GFF5725	0.15	-0.7