Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4870 and GFF4871 overlap by 4 nucleotides GFF4871 and GFF4872 overlap by 4 nucleotides GFF4872 and GFF4873 overlap by 4 nucleotides GFF4873 and GFF4874 are separated by 50 nucleotides GFF4874 and GFF4875 are separated by 26 nucleotides
GFF4870 - Glycosidases, at 242,547 to 243,080
GFF4870
GFF4871 - FIG00457034: hypothetical protein, at 243,077 to 243,340
GFF4871
GFF4872 - ParA-like protein, at 243,337 to 243,975
GFF4872
GFF4873 - no description, at 243,972 to 244,178
GFF4873
GFF4874 - Plasmid replication initiator protein, at 244,229 to 245,077
GFF4874
GFF4875 - hypothetical protein, at 245,104 to 245,385
GFF4875
Position (kb) 243
244
245 Strain fitness (log2 ratio) -2
-1
0
1 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.977 kb on + strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 242.978 kb on - strand, within GFF4870 at 243.143 kb on + strand, within GFF4871 at 243.144 kb on - strand, within GFF4871 at 243.159 kb on - strand, within GFF4871 at 243.213 kb on + strand, within GFF4871 at 243.213 kb on + strand, within GFF4871 at 243.213 kb on + strand, within GFF4871 at 243.213 kb on + strand, within GFF4871 at 243.213 kb on + strand, within GFF4871 at 243.527 kb on - strand, within GFF4872 at 243.527 kb on - strand, within GFF4872 at 243.635 kb on + strand, within GFF4872 at 243.635 kb on + strand, within GFF4872 at 243.636 kb on - strand, within GFF4872 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.061 kb on + strand, within GFF4873 at 244.062 kb on - strand, within GFF4873 at 244.062 kb on - strand, within GFF4873 at 244.062 kb on - strand, within GFF4873 at 244.062 kb on - strand, within GFF4873 at 244.062 kb on - strand, within GFF4873 at 244.062 kb on - strand, within GFF4873 at 244.064 kb on + strand, within GFF4873 at 244.064 kb on + strand, within GFF4873 at 244.064 kb on + strand, within GFF4873 at 244.065 kb on - strand, within GFF4873 at 244.071 kb on + strand, within GFF4873 at 244.071 kb on + strand, within GFF4873 at 244.071 kb on + strand, within GFF4873 at 244.072 kb on - strand, within GFF4873 at 244.072 kb on - strand, within GFF4873 at 244.072 kb on - strand, within GFF4873 at 244.072 kb on - strand, within GFF4873 at 244.080 kb on + strand, within GFF4873 at 244.081 kb on - strand, within GFF4873 at 244.085 kb on + strand, within GFF4873 at 244.094 kb on + strand, within GFF4873 at 244.094 kb on + strand, within GFF4873 at 244.150 kb on + strand, within GFF4873 at 244.158 kb on + strand at 244.158 kb on + strand at 244.159 kb on - strand at 244.159 kb on - strand at 244.159 kb on - strand at 244.173 kb on + strand at 244.174 kb on - strand at 244.174 kb on - strand at 244.174 kb on - strand at 244.174 kb on - strand at 244.197 kb on + strand at 244.197 kb on + strand at 244.198 kb on - strand at 244.198 kb on - strand at 244.198 kb on - strand at 244.231 kb on - strand at 244.314 kb on + strand, within GFF4874 at 244.314 kb on + strand, within GFF4874 at 244.315 kb on - strand, within GFF4874 at 244.315 kb on - strand, within GFF4874 at 244.315 kb on - strand, within GFF4874 at 244.315 kb on - strand, within GFF4874 at 244.369 kb on - strand, within GFF4874 at 244.369 kb on - strand, within GFF4874 at 244.369 kb on - strand, within GFF4874 at 244.464 kb on + strand, within GFF4874 at 244.465 kb on - strand, within GFF4874 at 244.465 kb on - strand, within GFF4874 at 244.465 kb on - strand, within GFF4874 at 244.465 kb on - strand, within GFF4874 at 244.500 kb on + strand, within GFF4874 at 244.500 kb on + strand, within GFF4874 at 244.501 kb on - strand, within GFF4874 at 244.501 kb on - strand, within GFF4874 at 244.501 kb on - strand, within GFF4874 at 244.501 kb on - strand, within GFF4874 at 244.548 kb on + strand, within GFF4874 at 244.548 kb on + strand, within GFF4874 at 244.548 kb on + strand, within GFF4874 at 244.548 kb on + strand, within GFF4874 at 244.548 kb on + strand, within GFF4874 at 244.738 kb on + strand, within GFF4874 at 244.739 kb on - strand, within GFF4874 at 244.739 kb on - strand, within GFF4874 at 244.767 kb on + strand, within GFF4874 at 244.767 kb on + strand, within GFF4874 at 244.767 kb on + strand, within GFF4874 at 245.141 kb on + strand, within GFF4875 at 245.142 kb on - strand, within GFF4875
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 242,977 + GFF4870 0.81 -1.0 242,977 + GFF4870 0.81 -0.7 242,977 + GFF4870 0.81 +0.2 242,977 + GFF4870 0.81 +0.1 242,977 + GFF4870 0.81 -0.7 242,977 + GFF4870 0.81 -0.8 242,977 + GFF4870 0.81 -0.3 242,977 + GFF4870 0.81 +0.0 242,977 + GFF4870 0.81 -0.9 242,977 + GFF4870 0.81 +0.0 242,977 + GFF4870 0.81 +0.6 242,977 + GFF4870 0.81 -0.4 242,977 + GFF4870 0.81 -0.2 242,977 + GFF4870 0.81 -1.4 242,977 + GFF4870 0.81 +0.5 242,977 + GFF4870 0.81 -1.5 242,977 + GFF4870 0.81 -0.7 242,977 + GFF4870 0.81 -0.5 242,977 + GFF4870 0.81 +0.9 242,978 - GFF4870 0.81 -0.5 242,978 - GFF4870 0.81 +0.5 242,978 - GFF4870 0.81 +0.3 242,978 - GFF4870 0.81 +0.7 242,978 - GFF4870 0.81 +0.5 242,978 - GFF4870 0.81 -1.4 242,978 - GFF4870 0.81 -1.1 242,978 - GFF4870 0.81 -0.3 242,978 - GFF4870 0.81 +1.1 242,978 - GFF4870 0.81 -0.4 242,978 - GFF4870 0.81 -1.5 242,978 - GFF4870 0.81 -0.3 243,143 + GFF4871 0.25 -2.5 243,144 - GFF4871 0.25 -1.7 243,159 - GFF4871 0.31 -1.4 243,213 + GFF4871 0.52 -0.1 243,213 + GFF4871 0.52 -0.4 243,213 + GFF4871 0.52 +0.6 243,213 + GFF4871 0.52 +0.2 243,213 + GFF4871 0.52 -1.5 243,527 - GFF4872 0.30 -1.8 243,527 - GFF4872 0.30 -0.3 243,635 + GFF4872 0.47 +0.9 243,635 + GFF4872 0.47 -0.4 243,636 - GFF4872 0.47 -0.1 244,061 + GFF4873 0.43 -1.1 244,061 + GFF4873 0.43 -1.5 244,061 + GFF4873 0.43 -1.9 244,061 + GFF4873 0.43 -0.1 244,061 + GFF4873 0.43 -1.6 244,061 + GFF4873 0.43 -2.0 244,061 + GFF4873 0.43 -1.0 244,061 + GFF4873 0.43 +1.5 244,061 + GFF4873 0.43 +0.2 244,061 + GFF4873 0.43 -1.4 244,061 + GFF4873 0.43 -0.0 244,061 + GFF4873 0.43 -0.2 244,062 - GFF4873 0.43 -0.1 244,062 - GFF4873 0.43 -0.2 244,062 - GFF4873 0.43 -0.5 244,062 - GFF4873 0.43 -0.4 244,062 - GFF4873 0.43 -0.1 244,062 - GFF4873 0.43 -0.5 244,064 + GFF4873 0.44 -0.1 244,064 + GFF4873 0.44 +0.5 244,064 + GFF4873 0.44 -0.4 244,065 - GFF4873 0.45 -0.3 244,071 + GFF4873 0.48 +0.6 244,071 + GFF4873 0.48 -0.9 244,071 + GFF4873 0.48 -1.0 244,072 - GFF4873 0.48 -0.1 244,072 - GFF4873 0.48 -2.1 244,072 - GFF4873 0.48 -0.2 244,072 - GFF4873 0.48 -0.0 244,080 + GFF4873 0.52 +0.0 244,081 - GFF4873 0.53 -0.4 244,085 + GFF4873 0.55 -0.2 244,094 + GFF4873 0.59 -0.1 244,094 + GFF4873 0.59 +0.5 244,150 + GFF4873 0.86 -1.2 244,158 + -0.4 244,158 + -0.2 244,159 - -0.0 244,159 - -0.3 244,159 - -0.1 244,173 + +0.5 244,174 - -0.9 244,174 - -0.5 244,174 - -0.1 244,174 - +0.2 244,197 + -0.3 244,197 + -0.4 244,198 - -1.1 244,198 - +0.0 244,198 - +0.5 244,231 - -0.8 244,314 + GFF4874 0.10 -0.8 244,314 + GFF4874 0.10 -0.0 244,315 - GFF4874 0.10 -0.5 244,315 - GFF4874 0.10 -0.3 244,315 - GFF4874 0.10 -0.7 244,315 - GFF4874 0.10 -0.6 244,369 - GFF4874 0.16 -0.2 244,369 - GFF4874 0.16 +1.0 244,369 - GFF4874 0.16 -0.1 244,464 + GFF4874 0.28 -0.9 244,465 - GFF4874 0.28 +0.9 244,465 - GFF4874 0.28 +0.8 244,465 - GFF4874 0.28 -0.9 244,465 - GFF4874 0.28 -0.6 244,500 + GFF4874 0.32 +0.9 244,500 + GFF4874 0.32 +0.1 244,501 - GFF4874 0.32 -0.6 244,501 - GFF4874 0.32 -1.0 244,501 - GFF4874 0.32 +0.5 244,501 - GFF4874 0.32 -1.1 244,548 + GFF4874 0.38 +1.6 244,548 + GFF4874 0.38 +0.2 244,548 + GFF4874 0.38 +1.7 244,548 + GFF4874 0.38 -0.2 244,548 + GFF4874 0.38 -0.1 244,738 + GFF4874 0.60 +0.6 244,739 - GFF4874 0.60 +0.4 244,739 - GFF4874 0.60 -1.2 244,767 + GFF4874 0.63 -0.6 244,767 + GFF4874 0.63 -0.2 244,767 + GFF4874 0.63 +0.9 245,141 + GFF4875 0.13 +0.1 245,142 - GFF4875 0.13 -0.4
Or see this region's nucleotide sequence