Strain Fitness in Variovorax sp. SCN45 around GFF4668

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
24,634	+		GFF4667	0.60	-0.3
24,635	-		GFF4667	0.60	-0.7
24,635	-		GFF4667	0.60	-0.4
24,680	-		GFF4667	0.64	-0.5
24,680	-		GFF4667	0.64	-1.8
24,896	-		GFF4667	0.86	-0.7
25,410	+		GFF4668	0.21	+0.2
25,410	+		GFF4668	0.21	+2.0
25,410	+		GFF4668	0.21	-1.2
25,411	-		GFF4668	0.21	+0.2
25,614	+		GFF4668	0.41	+0.5
25,614	+		GFF4668	0.41	+0.6
25,615	-		GFF4668	0.41	+1.1
25,615	-		GFF4668	0.41	-0.0
26,242	+				+1.5
26,243	-				+0.9
26,243	-				-0.1
26,296	+				+0.3
26,297	-				+0.0
26,300	+				-0.8
26,301	-				+1.0
26,302	+				-0.1
26,302	+				-0.7
26,302	+				-0.3
26,303	-				-0.6