Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4266 and GFF4267 are separated by 132 nucleotides GFF4267 and GFF4268 are separated by 83 nucleotides
GFF4266 - Alkanal monooxygenase alpha chain (EC 1.14.14.3), at 186,379 to 187,401
GFF4266
GFF4267 - Transcriptional regulator, AraC family, at 187,534 to 188,505
GFF4267
GFF4268 - Uncharacterized MFS-type transporter, at 188,589 to 189,806
GFF4268
Position (kb) 187
188
189 Strain fitness (log2 ratio) -2
-1
0
1
2 at 186.545 kb on + strand, within GFF4266 at 186.545 kb on + strand, within GFF4266 at 186.623 kb on + strand, within GFF4266 at 186.623 kb on + strand, within GFF4266 at 186.623 kb on + strand, within GFF4266 at 186.623 kb on + strand, within GFF4266 at 186.624 kb on - strand, within GFF4266 at 186.624 kb on - strand, within GFF4266 at 186.624 kb on - strand, within GFF4266 at 186.624 kb on - strand, within GFF4266 at 187.136 kb on + strand, within GFF4266 at 187.136 kb on + strand, within GFF4266 at 187.136 kb on + strand, within GFF4266 at 187.266 kb on - strand, within GFF4266 at 187.397 kb on + strand at 187.841 kb on + strand, within GFF4267 at 187.842 kb on - strand, within GFF4267 at 188.035 kb on + strand, within GFF4267 at 188.035 kb on + strand, within GFF4267 at 188.035 kb on + strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.036 kb on - strand, within GFF4267 at 188.088 kb on - strand, within GFF4267 at 188.659 kb on - strand at 189.108 kb on + strand, within GFF4268 at 189.393 kb on + strand, within GFF4268 at 189.393 kb on + strand, within GFF4268 at 189.393 kb on + strand, within GFF4268 at 189.394 kb on - strand, within GFF4268 at 189.394 kb on - strand, within GFF4268 at 189.394 kb on - strand, within GFF4268 at 189.394 kb on - strand, within GFF4268 at 189.394 kb on - strand, within GFF4268 at 189.394 kb on - strand, within GFF4268
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 186,545 + GFF4266 0.16 -0.4 186,545 + GFF4266 0.16 -0.0 186,623 + GFF4266 0.24 +0.5 186,623 + GFF4266 0.24 +0.5 186,623 + GFF4266 0.24 -0.6 186,623 + GFF4266 0.24 +0.5 186,624 - GFF4266 0.24 -1.4 186,624 - GFF4266 0.24 +0.6 186,624 - GFF4266 0.24 +1.5 186,624 - GFF4266 0.24 -0.3 187,136 + GFF4266 0.74 -0.3 187,136 + GFF4266 0.74 +0.5 187,136 + GFF4266 0.74 +2.0 187,266 - GFF4266 0.87 +1.0 187,397 + -0.7 187,841 + GFF4267 0.32 -0.1 187,842 - GFF4267 0.32 -0.2 188,035 + GFF4267 0.52 +0.4 188,035 + GFF4267 0.52 +0.1 188,035 + GFF4267 0.52 -0.0 188,036 - GFF4267 0.52 -0.3 188,036 - GFF4267 0.52 -2.0 188,036 - GFF4267 0.52 +0.7 188,036 - GFF4267 0.52 +0.4 188,036 - GFF4267 0.52 +0.1 188,036 - GFF4267 0.52 -1.1 188,036 - GFF4267 0.52 -0.7 188,036 - GFF4267 0.52 +1.7 188,088 - GFF4267 0.57 +0.1 188,659 - +0.6 189,108 + GFF4268 0.43 -0.1 189,393 + GFF4268 0.66 -0.2 189,393 + GFF4268 0.66 -0.3 189,393 + GFF4268 0.66 -0.0 189,394 - GFF4268 0.66 +0.2 189,394 - GFF4268 0.66 +0.3 189,394 - GFF4268 0.66 -1.3 189,394 - GFF4268 0.66 +0.9 189,394 - GFF4268 0.66 +0.3 189,394 - GFF4268 0.66 -1.7
Or see this region's nucleotide sequence