Strain Fitness in Variovorax sp. SCN45 around GFF4119

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
22,267	+		GFF4117	0.60	-0.8
22,501	+		GFF4117	0.79	+0.4
22,535	-		GFF4117	0.82	-0.8
22,624	+		GFF4117	0.90	-0.3
23,134	+				-0.4
23,134	+				+0.3
23,288	+		GFF4119	0.86	-0.2
23,288	+		GFF4119	0.86	-1.5
23,633	-		GFF4120	0.41	+0.7
23,786	+		GFF4120	0.69	-2.3
23,866	-		GFF4120	0.84	+1.7
23,949	-				+0.7
24,175	+				+1.0
24,176	-				-0.1
24,187	-				-0.4
24,215	+				-0.2
24,216	-				-1.2
24,235	-				-2.6
24,254	-				-0.6
24,303	+				-1.6
24,304	-				+0.2