Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1471 and GFF1472 overlap by 8 nucleotides GFF1472 and GFF1473 are separated by 42 nucleotides
GFF1471 - Uncharacterized MFS-type transporter, at 62,193 to 63,647
GFF1471
GFF1472 - Tricarboxylate transport protein TctC, at 63,640 to 64,608
GFF1472
GFF1473 - Amidase family protein BBta_1912, at 64,651 to 66,060
GFF1473
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 62.767 kb on + strand, within GFF1471 at 62.768 kb on - strand, within GFF1471 at 62.819 kb on + strand, within GFF1471 at 62.820 kb on - strand, within GFF1471 at 62.820 kb on - strand, within GFF1471 at 62.820 kb on - strand, within GFF1471 at 62.993 kb on - strand, within GFF1471 at 63.303 kb on + strand, within GFF1471 at 63.472 kb on + strand, within GFF1471 at 63.472 kb on + strand, within GFF1471 at 63.472 kb on + strand, within GFF1471 at 63.472 kb on + strand, within GFF1471 at 63.473 kb on - strand, within GFF1471 at 63.473 kb on - strand, within GFF1471 at 63.473 kb on - strand, within GFF1471 at 63.541 kb on - strand at 63.687 kb on - strand at 64.072 kb on - strand, within GFF1472 at 64.211 kb on + strand, within GFF1472 at 64.211 kb on + strand, within GFF1472 at 64.212 kb on - strand, within GFF1472 at 64.212 kb on - strand, within GFF1472 at 64.292 kb on + strand, within GFF1472 at 64.293 kb on - strand, within GFF1472 at 64.293 kb on - strand, within GFF1472 at 64.307 kb on + strand, within GFF1472 at 64.307 kb on + strand, within GFF1472 at 64.307 kb on + strand, within GFF1472 at 64.308 kb on - strand, within GFF1472 at 64.308 kb on - strand, within GFF1472 at 64.308 kb on - strand, within GFF1472 at 64.308 kb on - strand, within GFF1472 at 64.615 kb on + strand at 64.616 kb on - strand at 64.652 kb on + strand at 64.652 kb on + strand at 64.653 kb on - strand at 64.653 kb on - strand at 64.950 kb on + strand, within GFF1473 at 65.441 kb on + strand, within GFF1473 at 65.442 kb on - strand, within GFF1473 at 65.442 kb on - strand, within GFF1473 at 65.447 kb on + strand, within GFF1473 at 65.447 kb on + strand, within GFF1473 at 65.448 kb on - strand, within GFF1473 at 65.448 kb on - strand, within GFF1473
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 62,767 + GFF1471 0.39 -0.7 62,768 - GFF1471 0.40 -1.0 62,819 + GFF1471 0.43 -0.2 62,820 - GFF1471 0.43 -0.8 62,820 - GFF1471 0.43 -0.2 62,820 - GFF1471 0.43 -0.0 62,993 - GFF1471 0.55 +0.8 63,303 + GFF1471 0.76 +0.9 63,472 + GFF1471 0.88 -2.1 63,472 + GFF1471 0.88 -0.4 63,472 + GFF1471 0.88 +0.4 63,472 + GFF1471 0.88 -1.0 63,473 - GFF1471 0.88 +0.8 63,473 - GFF1471 0.88 -0.4 63,473 - GFF1471 0.88 +0.4 63,541 - +0.5 63,687 - +0.2 64,072 - GFF1472 0.45 -0.4 64,211 + GFF1472 0.59 -0.4 64,211 + GFF1472 0.59 -0.5 64,212 - GFF1472 0.59 -0.5 64,212 - GFF1472 0.59 +0.2 64,292 + GFF1472 0.67 -0.4 64,293 - GFF1472 0.67 -1.3 64,293 - GFF1472 0.67 -0.7 64,307 + GFF1472 0.69 -1.9 64,307 + GFF1472 0.69 -1.0 64,307 + GFF1472 0.69 -0.9 64,308 - GFF1472 0.69 +0.2 64,308 - GFF1472 0.69 +0.3 64,308 - GFF1472 0.69 -0.0 64,308 - GFF1472 0.69 -0.7 64,615 + -1.0 64,616 - +1.8 64,652 + -0.3 64,652 + -0.9 64,653 - +0.5 64,653 - -1.1 64,950 + GFF1473 0.21 -0.2 65,441 + GFF1473 0.56 -0.0 65,442 - GFF1473 0.56 +0.6 65,442 - GFF1473 0.56 +0.8 65,447 + GFF1473 0.56 -0.0 65,447 + GFF1473 0.56 -0.7 65,448 - GFF1473 0.57 +0.0 65,448 - GFF1473 0.57 +0.0
Or see this region's nucleotide sequence