Strain Fitness in Variovorax sp. SCN45 around GFF806

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
109,618	+		GFF805	0.11	-0.3
109,618	+		GFF805	0.11	+0.1
109,619	-		GFF805	0.11	+0.4
109,619	-		GFF805	0.11	-0.2
109,663	+		GFF805	0.16	-0.0
109,663	+		GFF805	0.16	+0.0
109,663	+		GFF805	0.16	-0.0
109,663	+		GFF805	0.16	-0.2
109,664	-		GFF805	0.16	-0.6
109,688	-		GFF805	0.18	-0.5
109,688	-		GFF805	0.18	-1.1
109,688	-		GFF805	0.18	+0.1
109,688	-		GFF805	0.18	+0.4
109,688	-		GFF805	0.18	+0.1
109,688	-		GFF805	0.18	+1.3
109,831	+		GFF805	0.34	+0.5
109,832	-		GFF805	0.34	-0.6
109,832	-		GFF805	0.34	+0.1
110,110	+		GFF805	0.65	+0.7
110,110	+		GFF805	0.65	-1.4
110,110	+		GFF805	0.65	-0.4
110,110	+		GFF805	0.65	-0.4
110,111	-		GFF805	0.65	-1.4
110,111	-		GFF805	0.65	-0.6
110,111	-		GFF805	0.65	+0.0
110,111	-		GFF805	0.65	-0.3
110,248	+		GFF805	0.80	-0.4
110,411	+				-0.1
110,411	+				+0.5
110,411	+				+0.2
110,411	+				-0.8
110,412	-				+1.8
110,412	-				-0.3
110,412	-				+0.5
110,412	-				+0.0
110,412	-				+0.1
110,412	-				-0.5
110,412	-				-0.4
110,442	+				-0.2
110,442	+				-0.9
110,442	+				+0.8
110,442	+				-0.6
110,442	+				-0.4
110,443	-				-0.9
110,443	-				-0.4
110,443	-				-0.3
110,468	+				+0.0
110,468	+				+0.2
110,468	+				-0.4
110,468	+				+0.1
110,468	+				-0.1
110,468	+				-0.2
110,468	+				+0.6
110,469	-				+0.1
110,472	+				-0.9
110,472	+				-2.8
110,472	+				+0.5
110,472	+				+0.7
110,473	-				-1.8
110,473	-				+0.6
110,473	-				+0.2
110,473	-				+0.1
110,473	-				-0.0
110,532	+		GFF806	0.12	-2.2
110,532	+		GFF806	0.12	+1.0
110,532	+		GFF806	0.12	-0.3
110,538	+		GFF806	0.13	-0.6
110,538	+		GFF806	0.13	+1.4
110,538	+		GFF806	0.13	-0.3
110,538	+		GFF806	0.13	+0.4
110,538	+		GFF806	0.13	-0.1
110,538	+		GFF806	0.13	-0.7
110,538	+		GFF806	0.13	-0.4
110,538	+		GFF806	0.13	-1.2
110,538	+		GFF806	0.13	+1.1
110,539	-		GFF806	0.13	-0.5
110,539	-		GFF806	0.13	+1.8
110,539	-		GFF806	0.13	-0.0
110,539	-		GFF806	0.13	-0.2
110,539	-		GFF806	0.13	+0.1
110,539	-		GFF806	0.13	-0.1
110,539	-		GFF806	0.13	-0.0
110,583	+		GFF806	0.20	-0.4
110,584	-		GFF806	0.20	+0.3
110,584	-		GFF806	0.20	-0.0
110,667	+		GFF806	0.33	+1.4
110,667	+		GFF806	0.33	-0.9
110,667	+		GFF806	0.33	+0.0
110,668	-		GFF806	0.33	+0.4
110,668	-		GFF806	0.33	+0.2
110,668	-		GFF806	0.33	-0.2
110,668	-		GFF806	0.33	-0.2
110,668	-		GFF806	0.33	+1.6
110,796	+		GFF806	0.53	+1.4
110,796	+		GFF806	0.53	+0.6
110,796	+		GFF806	0.53	+0.1
110,796	+		GFF806	0.53	+1.2
110,796	+		GFF806	0.53	-0.5
110,797	-		GFF806	0.53	-0.2
110,797	-		GFF806	0.53	+0.3
110,797	-		GFF806	0.53	-0.1
110,913	+		GFF806	0.71	+1.3
110,913	+		GFF806	0.71	+0.5
110,913	+		GFF806	0.71	+0.3
110,913	+		GFF806	0.71	-0.6
110,913	+		GFF806	0.71	+0.6
110,913	+		GFF806	0.71	-0.2
110,913	+		GFF806	0.71	-0.2
110,914	-		GFF806	0.72	+0.8
110,914	-		GFF806	0.72	+0.8
110,914	-		GFF806	0.72	-0.2
110,914	-		GFF806	0.72	-2.3
110,914	-		GFF806	0.72	-0.2
110,914	-		GFF806	0.72	-0.1
110,914	-		GFF806	0.72	-0.2
110,914	-		GFF806	0.72	+1.3
110,914	-		GFF806	0.72	+0.9
110,914	-		GFF806	0.72	+0.8
110,914	-		GFF806	0.72	-1.0
110,914	-		GFF806	0.72	-0.8
110,914	-		GFF806	0.72	-0.1
111,195	-		GFF807	0.12	-0.6
111,195	-		GFF807	0.12	-1.2
111,466	-		GFF807	0.48	+1.7
111,466	-		GFF807	0.48	+1.1
111,949	+				-0.3
111,949	+				-0.5
111,949	+				-1.0
111,950	-				-0.6
111,950	-				+0.6
111,950	-				-1.2
111,960	+				-0.8
111,960	+				-0.9
111,960	+				-1.6
111,961	-				-0.3
111,961	-				-0.4
111,961	-				+0.9
111,990	+				-0.6
112,071	+				+0.1
112,072	-				-0.0
112,072	-				+0.6
112,072	-				-0.2
112,072	-				-0.1
112,072	-				+0.3
112,072	-				-2.1
112,072	-				-0.6
112,072	-				+0.3