Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7277 and GFF7278 overlap by 8 nucleotides GFF7278 and GFF7279 are separated by 290 nucleotides
GFF7277 - Mobile element protein, at 25,884 to 26,693
GFF7277
GFF7278 - Transposase, at 26,686 to 28,197
GFF7278
GFF7279 - no description, at 28,488 to 28,781
GFF7279
Position (kb) 26
27
28
29 Strain fitness (log2 ratio) -1
0
1
2 at 25.784 kb on + strand at 25.784 kb on + strand at 25.784 kb on + strand at 25.785 kb on - strand at 25.785 kb on - strand at 25.785 kb on - strand at 25.785 kb on - strand at 25.835 kb on + strand at 25.973 kb on + strand, within GFF7277 at 25.974 kb on - strand, within GFF7277 at 25.974 kb on - strand, within GFF7277 at 25.974 kb on - strand, within GFF7277 at 26.300 kb on - strand, within GFF7277 at 26.724 kb on - strand at 27.057 kb on - strand, within GFF7278 at 27.057 kb on - strand, within GFF7278 at 27.530 kb on + strand, within GFF7278 at 27.530 kb on + strand, within GFF7278 at 27.617 kb on + strand, within GFF7278 at 27.618 kb on - strand, within GFF7278 at 27.618 kb on - strand, within GFF7278 at 27.761 kb on + strand, within GFF7278 at 27.764 kb on + strand, within GFF7278 at 27.924 kb on - strand, within GFF7278 at 28.326 kb on - strand at 28.326 kb on - strand at 28.360 kb on + strand at 28.538 kb on - strand, within GFF7279 at 28.539 kb on + strand, within GFF7279 at 28.539 kb on + strand, within GFF7279 at 28.690 kb on - strand, within GFF7279 at 28.723 kb on + strand, within GFF7279 at 28.806 kb on - strand at 28.845 kb on - strand at 28.845 kb on - strand at 28.984 kb on + strand at 28.984 kb on + strand at 29.143 kb on + strand at 29.144 kb on - strand at 29.144 kb on - strand at 29.147 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 25,784 + +0.4 25,784 + +1.8 25,784 + +0.3 25,785 - +0.5 25,785 - -0.1 25,785 - +0.0 25,785 - -0.2 25,835 + +0.6 25,973 + GFF7277 0.11 +1.0 25,974 - GFF7277 0.11 -0.1 25,974 - GFF7277 0.11 -0.5 25,974 - GFF7277 0.11 -0.7 26,300 - GFF7277 0.51 -0.4 26,724 - -0.4 27,057 - GFF7278 0.25 -0.2 27,057 - GFF7278 0.25 -0.3 27,530 + GFF7278 0.56 -0.7 27,530 + GFF7278 0.56 -1.0 27,617 + GFF7278 0.62 -1.3 27,618 - GFF7278 0.62 -1.4 27,618 - GFF7278 0.62 +0.1 27,761 + GFF7278 0.71 +0.1 27,764 + GFF7278 0.71 -0.1 27,924 - GFF7278 0.82 +0.6 28,326 - -0.5 28,326 - -0.4 28,360 + +0.1 28,538 - GFF7279 0.17 -0.2 28,539 + GFF7279 0.17 +0.9 28,539 + GFF7279 0.17 +0.6 28,690 - GFF7279 0.69 -0.3 28,723 + GFF7279 0.80 -0.7 28,806 - -0.0 28,845 - -0.4 28,845 - +0.3 28,984 + -1.5 28,984 + +0.2 29,143 + +1.4 29,144 - +1.2 29,144 - -0.2 29,147 + +0.3
Or see this region's nucleotide sequence