Strain Fitness in Variovorax sp. SCN45 around GFF6982

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
152	-				-1.1
171	-				-0.4
171	-				+1.6
209	-				-0.0
276	+				+0.7
376	-				-2.3
621	+		GFF6981	0.42	+1.1
674	+		GFF6981	0.51	-0.8
781	-		GFF6981	0.69	+0.7
909	-				-0.9
930	+				-0.2
1,040	+		GFF6982	0.16	-1.0
1,040	+		GFF6982	0.16	+0.7
1,257	-		GFF6982	0.61	-0.9
1,257	-		GFF6982	0.61	-0.7
1,509	+				+0.3
1,510	-				+0.1
1,510	-				+0.5
1,724	-		GFF6983	0.20	+0.1
1,724	-		GFF6983	0.20	-0.1
1,724	-		GFF6983	0.20	+0.7
2,386	+		GFF6983	0.72	-0.4
2,386	+		GFF6983	0.72	-0.3