Strain Fitness in Variovorax sp. SCN45 around GFF5907

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
122,205	+		GFF5906	0.15	-0.8
122,206	-		GFF5906	0.15	+0.1
122,206	-		GFF5906	0.15	+0.2
122,206	-		GFF5906	0.15	-0.8
122,208	+		GFF5906	0.15	+1.4
122,215	-		GFF5906	0.16	-0.1
122,215	-		GFF5906	0.16	+1.3
122,382	+		GFF5906	0.32	+0.8
122,382	+		GFF5906	0.32	+1.6
122,383	-		GFF5906	0.32	+1.7
122,383	-		GFF5906	0.32	+0.2
122,550	+		GFF5906	0.48	-0.0
122,550	+		GFF5906	0.48	+0.4
122,551	-		GFF5906	0.48	+0.2
122,551	-		GFF5906	0.48	+0.1
122,916	+		GFF5906	0.83	+0.0
123,311	-		GFF5907	0.24	-0.8
123,311	-		GFF5907	0.24	+0.7
123,853	+		GFF5907	0.74	-0.9
123,853	+		GFF5907	0.74	-0.6
124,112	+				+0.7
124,114	+				-1.2
124,114	+				-0.4
124,115	-				-1.0
124,180	-				-0.1
124,195	-				-1.2
124,877	+		GFF5909	0.18	+0.7
124,944	-		GFF5909	0.25	+0.1
124,976	+		GFF5909	0.28	-1.4
124,976	+		GFF5909	0.28	-0.9
124,976	+		GFF5909	0.28	-1.3
124,977	-		GFF5909	0.28	-0.7
124,977	-		GFF5909	0.28	-1.1
124,977	-		GFF5909	0.28	+0.0