Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4505 and GFF4506 are separated by 481 nucleotides GFF4506 and GFF4507 are separated by 7 nucleotides GFF4507 and GFF4508 are separated by 15 nucleotides GFF4508 and GFF4509 are separated by 92 nucleotides GFF4509 and GFF4510 are separated by 39 nucleotides
GFF4505 - hypothetical protein, at 148,218 to 149,147
GFF4505
GFF4506 - hypothetical protein, at 149,629 to 150,090
GFF4506
GFF4507 - no description, at 150,098 to 150,547
GFF4507
GFF4508 - no description, at 150,563 to 151,051
GFF4508
GFF4509 - no description, at 151,144 to 151,398
GFF4509
GFF4510 - hypothetical protein, at 151,438 to 152,877
GFF4510
Position (kb) 150
151 Strain fitness (log2 ratio) -2
-1
0
1 at 149.127 kb on + strand at 149.128 kb on - strand at 149.128 kb on - strand at 149.238 kb on + strand at 149.238 kb on + strand at 149.238 kb on + strand at 149.239 kb on - strand at 149.246 kb on + strand at 149.246 kb on + strand at 149.247 kb on - strand at 149.247 kb on - strand at 149.268 kb on + strand at 149.348 kb on + strand at 149.348 kb on + strand at 149.348 kb on + strand at 149.348 kb on + strand at 149.348 kb on + strand at 149.348 kb on + strand at 149.348 kb on + strand at 149.349 kb on - strand at 149.349 kb on - strand at 149.349 kb on - strand at 149.349 kb on - strand at 149.349 kb on - strand at 149.416 kb on + strand at 149.416 kb on + strand at 149.417 kb on - strand at 149.417 kb on - strand at 149.417 kb on - strand at 149.417 kb on - strand at 149.417 kb on - strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.484 kb on - strand at 149.606 kb on + strand at 149.645 kb on + strand at 149.646 kb on - strand at 149.646 kb on - strand at 149.818 kb on + strand, within GFF4506 at 149.818 kb on + strand, within GFF4506 at 149.818 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 150.071 kb on + strand at 150.071 kb on + strand at 150.072 kb on - strand at 150.089 kb on - strand at 150.123 kb on + strand at 150.124 kb on - strand at 150.164 kb on + strand, within GFF4507 at 150.164 kb on + strand, within GFF4507 at 150.164 kb on + strand, within GFF4507 at 150.164 kb on + strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.167 kb on - strand, within GFF4507 at 150.167 kb on - strand, within GFF4507 at 150.258 kb on - strand, within GFF4507 at 150.258 kb on - strand, within GFF4507 at 150.258 kb on - strand, within GFF4507 at 150.261 kb on + strand, within GFF4507 at 150.261 kb on + strand, within GFF4507 at 150.261 kb on + strand, within GFF4507 at 150.262 kb on - strand, within GFF4507 at 150.262 kb on - strand, within GFF4507 at 150.262 kb on - strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.276 kb on - strand, within GFF4507 at 150.276 kb on - strand, within GFF4507 at 150.560 kb on + strand at 150.560 kb on + strand at 150.560 kb on + strand at 150.560 kb on + strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.584 kb on + strand at 150.584 kb on + strand at 150.584 kb on + strand at 150.585 kb on - strand at 150.642 kb on + strand, within GFF4508 at 150.643 kb on - strand, within GFF4508 at 150.674 kb on + strand, within GFF4508 at 150.674 kb on + strand, within GFF4508 at 150.675 kb on - strand, within GFF4508 at 150.769 kb on - strand, within GFF4508 at 150.881 kb on + strand, within GFF4508 at 150.882 kb on - strand, within GFF4508 at 150.882 kb on - strand, within GFF4508 at 150.899 kb on + strand, within GFF4508 at 150.899 kb on + strand, within GFF4508 at 150.900 kb on - strand, within GFF4508 at 150.900 kb on - strand, within GFF4508 at 150.900 kb on - strand, within GFF4508 at 150.923 kb on + strand, within GFF4508 at 150.924 kb on - strand, within GFF4508 at 151.171 kb on + strand, within GFF4509 at 151.171 kb on + strand, within GFF4509 at 151.171 kb on + strand, within GFF4509 at 151.172 kb on - strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.307 kb on - strand, within GFF4509 at 151.388 kb on - strand at 151.458 kb on + strand at 151.458 kb on + strand at 151.518 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 149,127 + +0.1 149,128 - -1.3 149,128 - +0.1 149,238 + -0.3 149,238 + +0.7 149,238 + -1.7 149,239 - -1.0 149,246 + -0.7 149,246 + -0.7 149,247 - -0.2 149,247 - -0.8 149,268 + -0.1 149,348 + -0.1 149,348 + -0.2 149,348 + -2.4 149,348 + +0.6 149,348 + -0.2 149,348 + +0.6 149,348 + +0.2 149,349 - -0.2 149,349 - +0.3 149,349 - +0.1 149,349 - +0.1 149,349 - -2.1 149,416 + -0.7 149,416 + -0.0 149,417 - -0.1 149,417 - -1.0 149,417 - +0.5 149,417 - -0.3 149,417 - -0.3 149,483 + +0.1 149,483 + -0.2 149,483 + -0.1 149,483 + +0.3 149,483 + +1.1 149,484 - +1.1 149,606 + -1.2 149,645 + -1.1 149,646 - -1.1 149,646 - +0.7 149,818 + GFF4506 0.41 +0.0 149,818 + GFF4506 0.41 -0.3 149,818 + GFF4506 0.41 +0.0 149,978 + GFF4506 0.76 +0.6 149,978 + GFF4506 0.76 +0.1 149,978 + GFF4506 0.76 +0.5 149,978 + GFF4506 0.76 -0.8 149,978 + GFF4506 0.76 +0.3 149,978 + GFF4506 0.76 -0.1 149,978 + GFF4506 0.76 +0.4 149,978 + GFF4506 0.76 -0.2 149,978 + GFF4506 0.76 +1.1 149,978 + GFF4506 0.76 +0.1 149,978 + GFF4506 0.76 +1.5 149,978 + GFF4506 0.76 -0.7 149,978 + GFF4506 0.76 -0.7 149,978 + GFF4506 0.76 -1.2 149,979 - GFF4506 0.76 -0.1 149,979 - GFF4506 0.76 -0.7 149,979 - GFF4506 0.76 -0.8 149,979 - GFF4506 0.76 -0.2 149,979 - GFF4506 0.76 -0.3 149,979 - GFF4506 0.76 -1.8 149,979 - GFF4506 0.76 -0.6 149,979 - GFF4506 0.76 +0.4 149,979 - GFF4506 0.76 -2.0 150,071 + -0.5 150,071 + -1.9 150,072 - -0.1 150,089 - -0.3 150,123 + -0.8 150,124 - -0.7 150,164 + GFF4507 0.15 -0.3 150,164 + GFF4507 0.15 -1.7 150,164 + GFF4507 0.15 -2.0 150,164 + GFF4507 0.15 -0.2 150,165 - GFF4507 0.15 -1.1 150,165 - GFF4507 0.15 +0.5 150,165 - GFF4507 0.15 +0.3 150,165 - GFF4507 0.15 -0.6 150,165 - GFF4507 0.15 -1.7 150,165 - GFF4507 0.15 -0.3 150,167 - GFF4507 0.15 -1.0 150,167 - GFF4507 0.15 +0.4 150,258 - GFF4507 0.36 -0.7 150,258 - GFF4507 0.36 -1.0 150,258 - GFF4507 0.36 -0.3 150,261 + GFF4507 0.36 -0.9 150,261 + GFF4507 0.36 -1.1 150,261 + GFF4507 0.36 -0.2 150,262 - GFF4507 0.36 -1.0 150,262 - GFF4507 0.36 -0.3 150,262 - GFF4507 0.36 -0.6 150,275 + GFF4507 0.39 +0.3 150,275 + GFF4507 0.39 -0.9 150,275 + GFF4507 0.39 +0.3 150,275 + GFF4507 0.39 -0.2 150,275 + GFF4507 0.39 -0.6 150,276 - GFF4507 0.40 +0.3 150,276 - GFF4507 0.40 -0.9 150,560 + -0.1 150,560 + +0.1 150,560 + -0.4 150,560 + -0.6 150,561 - +0.7 150,561 - -0.4 150,561 - -0.3 150,561 - +0.1 150,561 - -0.1 150,561 - +1.7 150,584 + +0.7 150,584 + -0.3 150,584 + -0.5 150,585 - -0.6 150,642 + GFF4508 0.16 +1.7 150,643 - GFF4508 0.16 +0.0 150,674 + GFF4508 0.23 +1.1 150,674 + GFF4508 0.23 -2.4 150,675 - GFF4508 0.23 -0.8 150,769 - GFF4508 0.42 +0.1 150,881 + GFF4508 0.65 -0.3 150,882 - GFF4508 0.65 -0.2 150,882 - GFF4508 0.65 +0.5 150,899 + GFF4508 0.69 -0.2 150,899 + GFF4508 0.69 +0.7 150,900 - GFF4508 0.69 +0.8 150,900 - GFF4508 0.69 -0.1 150,900 - GFF4508 0.69 +0.1 150,923 + GFF4508 0.74 -0.2 150,924 - GFF4508 0.74 -1.3 151,171 + GFF4509 0.11 +0.3 151,171 + GFF4509 0.11 +0.4 151,171 + GFF4509 0.11 -0.4 151,172 - GFF4509 0.11 +1.1 151,258 + GFF4509 0.45 -0.3 151,258 + GFF4509 0.45 -1.0 151,258 + GFF4509 0.45 -1.0 151,258 + GFF4509 0.45 +0.1 151,258 + GFF4509 0.45 -1.0 151,259 - GFF4509 0.45 -0.9 151,259 - GFF4509 0.45 -1.9 151,259 - GFF4509 0.45 -0.2 151,259 - GFF4509 0.45 +0.5 151,259 - GFF4509 0.45 -0.9 151,259 - GFF4509 0.45 +0.7 151,307 - GFF4509 0.64 -0.7 151,388 - +0.1 151,458 + -1.5 151,458 + -0.1 151,518 - -0.9
Or see this region's nucleotide sequence