Strain Fitness in Variovorax sp. SCN45 around GFF4332

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
254,694	-		GFF4331	0.84	-1.0
254,928	+				-0.5
255,035	-				+0.4
255,039	-				-0.3
255,336	-		GFF4332	0.19	-0.2
255,336	-		GFF4332	0.19	+2.1
255,431	+		GFF4332	0.25	-0.0
255,501	-		GFF4332	0.30	+0.3
255,501	-		GFF4332	0.30	+0.9
255,799	-		GFF4332	0.50	-0.5
256,503	-				-0.8
257,159	+		GFF4333	0.57	-0.2
257,333	+		GFF4333	0.76	-0.6
257,453	+		GFF4333	0.89	-1.7
257,454	-		GFF4333	0.89	-0.5
257,463	-				+1.1