Strain Fitness in Variovorax sp. SCN45 around GFF4045

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
255,510	+				+2.7
255,510	+				+1.5
255,511	-				-0.1
255,544	-				+0.8
255,636	-				-0.2
255,722	+				-0.8
255,723	-				+0.4
255,727	-				+0.3
255,747	-				-0.1
255,747	-				-0.3
255,846	+				+0.8
256,260	+		GFF4044	0.82	-1.1
256,364	+				-0.5
256,365	-				-1.2
256,421	+				+0.4
256,421	+				-1.5
256,422	-				-0.5
256,422	-				-0.5
256,433	+				-0.9
256,433	+				+0.3
256,575	-		GFF4045	0.29	+0.6
256,611	-		GFF4045	0.37	+1.2
256,611	-		GFF4045	0.37	+0.0
256,611	-		GFF4045	0.37	-0.0
256,668	+		GFF4045	0.51	-0.2
256,668	+		GFF4045	0.51	+0.8
256,669	-		GFF4045	0.51	-0.3
256,704	+		GFF4045	0.60	-0.0
256,705	-		GFF4045	0.60	+0.9
256,887	+				+0.5
256,888	-				-0.7
256,941	+				+0.2
257,627	+		GFF4046	0.21	-0.5