Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4016 and GFF4017 overlap by 8 nucleotides GFF4017 and GFF4018 overlap by 4 nucleotides GFF4018 and GFF4019 are separated by 4 nucleotides
GFF4016 - Arsenate reductase (EC 1.20.4.1), at 225,986 to 226,357
GFF4016
GFF4017 - Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family, at 226,350 to 226,859
GFF4017
GFF4018 - Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family, at 226,856 to 227,344
GFF4018
GFF4019 - Arsenical-resistance protein ACR3, at 227,349 to 228,407
GFF4019
Position (kb) 226
227
228 Strain fitness (log2 ratio) -2
-1
0
1
2 at 226.165 kb on - strand, within GFF4016 at 226.423 kb on + strand, within GFF4017 at 226.423 kb on + strand, within GFF4017 at 226.423 kb on + strand, within GFF4017 at 226.424 kb on - strand, within GFF4017 at 226.424 kb on - strand, within GFF4017 at 226.424 kb on - strand, within GFF4017 at 226.458 kb on + strand, within GFF4017 at 226.458 kb on + strand, within GFF4017 at 226.458 kb on + strand, within GFF4017 at 226.458 kb on + strand, within GFF4017 at 226.458 kb on + strand, within GFF4017 at 226.459 kb on - strand, within GFF4017 at 226.459 kb on - strand, within GFF4017 at 226.497 kb on + strand, within GFF4017 at 226.497 kb on + strand, within GFF4017 at 226.498 kb on - strand, within GFF4017 at 226.716 kb on - strand, within GFF4017 at 226.869 kb on + strand at 226.869 kb on + strand at 226.869 kb on + strand at 226.869 kb on + strand at 226.869 kb on + strand at 226.869 kb on + strand at 226.869 kb on + strand at 226.869 kb on + strand at 226.870 kb on - strand at 226.870 kb on - strand at 226.870 kb on - strand at 226.870 kb on - strand at 226.870 kb on - strand at 227.138 kb on + strand, within GFF4018 at 227.138 kb on + strand, within GFF4018 at 227.252 kb on + strand, within GFF4018 at 227.410 kb on - strand at 227.730 kb on + strand, within GFF4019 at 227.730 kb on + strand, within GFF4019 at 227.730 kb on + strand, within GFF4019 at 227.730 kb on + strand, within GFF4019 at 227.730 kb on + strand, within GFF4019 at 227.730 kb on + strand, within GFF4019 at 227.946 kb on + strand, within GFF4019 at 227.947 kb on - strand, within GFF4019 at 227.947 kb on - strand, within GFF4019
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 226,165 - GFF4016 0.48 -0.1 226,423 + GFF4017 0.14 -0.4 226,423 + GFF4017 0.14 -0.3 226,423 + GFF4017 0.14 +0.2 226,424 - GFF4017 0.15 +0.0 226,424 - GFF4017 0.15 +0.5 226,424 - GFF4017 0.15 +0.1 226,458 + GFF4017 0.21 -0.0 226,458 + GFF4017 0.21 +0.3 226,458 + GFF4017 0.21 +0.4 226,458 + GFF4017 0.21 +0.2 226,458 + GFF4017 0.21 -0.4 226,459 - GFF4017 0.21 +1.3 226,459 - GFF4017 0.21 -2.0 226,497 + GFF4017 0.29 -0.1 226,497 + GFF4017 0.29 -0.9 226,498 - GFF4017 0.29 +1.0 226,716 - GFF4017 0.72 -0.2 226,869 + +0.4 226,869 + -0.8 226,869 + +0.1 226,869 + -2.4 226,869 + -0.1 226,869 + +2.1 226,869 + +0.0 226,869 + +0.1 226,870 - -0.3 226,870 - -0.3 226,870 - -0.8 226,870 - -0.0 226,870 - -0.1 227,138 + GFF4018 0.58 +0.9 227,138 + GFF4018 0.58 +0.1 227,252 + GFF4018 0.81 -1.0 227,410 - -1.8 227,730 + GFF4019 0.36 -0.0 227,730 + GFF4019 0.36 -1.7 227,730 + GFF4019 0.36 -0.1 227,730 + GFF4019 0.36 -1.1 227,730 + GFF4019 0.36 +0.1 227,730 + GFF4019 0.36 -0.4 227,946 + GFF4019 0.56 -0.6 227,947 - GFF4019 0.56 -1.0 227,947 - GFF4019 0.56 +0.9
Or see this region's nucleotide sequence