Strain Fitness in Variovorax sp. SCN45 around GFF2113

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
161,400	+		GFF2112	0.15	-0.7
161,729	+		GFF2112	0.57	+0.3
161,729	+		GFF2112	0.57	+0.5
161,846	+		GFF2112	0.72	-0.9
161,970	-		GFF2112	0.88	-1.1
162,411	+		GFF2113	0.46	-0.3
162,412	-		GFF2113	0.46	-0.0
162,412	-		GFF2113	0.46	+1.2
162,474	+		GFF2113	0.56	+0.2
162,474	+		GFF2113	0.56	+0.2
162,474	+		GFF2113	0.56	-0.3
162,474	+		GFF2113	0.56	+0.6
162,474	+		GFF2113	0.56	+1.7
162,474	+		GFF2113	0.56	+0.5
162,474	+		GFF2113	0.56	+0.2
162,475	-		GFF2113	0.56	-0.1
162,475	-		GFF2113	0.56	-0.5
162,475	-		GFF2113	0.56	+0.0
162,475	-		GFF2113	0.56	-0.6
162,475	-		GFF2113	0.56	-1.7
162,475	-		GFF2113	0.56	+0.7
162,475	-		GFF2113	0.56	+1.0
162,475	-		GFF2113	0.56	+1.7
162,475	-		GFF2113	0.56	-0.8
162,475	-		GFF2113	0.56	-0.2
162,475	-		GFF2113	0.56	-0.1
162,475	-		GFF2113	0.56	-0.7
162,544	-		GFF2113	0.66	+1.7
162,799	-				-0.6
162,863	+				-0.7
163,018	-				-0.1
163,117	-		GFF2114	0.14	+0.3
163,135	-		GFF2114	0.15	+0.0
163,206	+		GFF2114	0.19	+0.4
163,206	+		GFF2114	0.19	+0.1
163,207	-		GFF2114	0.19	-0.9
163,366	-		GFF2114	0.29	+1.3
163,398	+		GFF2114	0.31	-0.1
163,398	+		GFF2114	0.31	+0.7
163,444	-		GFF2114	0.34	-0.6
163,444	-		GFF2114	0.34	-0.1
163,674	+		GFF2114	0.48	-0.4
163,674	+		GFF2114	0.48	-0.2
163,675	-		GFF2114	0.48	+0.1