Strain Fitness in Variovorax sp. SCN45 around GFF7339

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
7,239	+		GFF7338	0.13	+1.7
7,342	-		GFF7338	0.26	-0.8
7,947	-				-0.1
8,174	+		GFF7339	0.27	+1.0
8,175	-		GFF7339	0.27	+0.6
8,742	-				-0.8
8,847	+				-0.6
8,864	+				+0.1
8,864	+				+1.1
8,910	+		GFF7340	0.11	-0.6
8,911	-		GFF7340	0.11	-0.8
9,322	-		GFF7340	0.49	-0.8
9,322	-		GFF7340	0.49	-0.3
9,427	-		GFF7340	0.59	-1.5
9,427	-		GFF7340	0.59	-2.1
9,594	+		GFF7340	0.74	-0.1
9,625	-		GFF7340	0.77	+0.1
9,625	-		GFF7340	0.77	-0.1