Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6832 and GFF6833 are separated by 2 nucleotides GFF6833 and GFF6834 are separated by 91 nucleotides GFF6834 and GFF6835 are separated by 67 nucleotides GFF6835 and GFF6836 are separated by 74 nucleotides
GFF6832 - DnaJ-class molecular chaperone CbpA, at 18,022 to 18,984
GFF6832
GFF6833 - FIG00432169: hypothetical protein, at 18,987 to 19,304
GFF6833
GFF6834 - no description, at 19,396 to 19,851
GFF6834
GFF6835 - DNA-3-methyladenine glycosylase (EC 3.2.2.20), at 19,919 to 20,503
GFF6835
GFF6836 - hypothetical protein, at 20,578 to 20,931
GFF6836
Position (kb) 19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 18.406 kb on + strand, within GFF6832 at 18.406 kb on + strand, within GFF6832 at 18.406 kb on + strand, within GFF6832 at 18.406 kb on + strand, within GFF6832 at 18.406 kb on + strand, within GFF6832 at 18.406 kb on + strand, within GFF6832 at 18.406 kb on + strand, within GFF6832 at 18.407 kb on - strand, within GFF6832 at 18.407 kb on - strand, within GFF6832 at 18.407 kb on - strand, within GFF6832 at 18.407 kb on - strand, within GFF6832 at 18.407 kb on - strand, within GFF6832 at 18.407 kb on - strand, within GFF6832 at 18.643 kb on + strand, within GFF6832 at 18.643 kb on + strand, within GFF6832 at 18.643 kb on + strand, within GFF6832 at 18.644 kb on - strand, within GFF6832 at 18.644 kb on - strand, within GFF6832 at 18.676 kb on + strand, within GFF6832 at 18.676 kb on + strand, within GFF6832 at 18.676 kb on + strand, within GFF6832 at 18.700 kb on + strand, within GFF6832 at 18.700 kb on + strand, within GFF6832 at 18.700 kb on + strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.701 kb on - strand, within GFF6832 at 18.868 kb on + strand, within GFF6832 at 18.868 kb on + strand, within GFF6832 at 18.868 kb on + strand, within GFF6832 at 18.868 kb on + strand, within GFF6832 at 18.869 kb on - strand, within GFF6832 at 18.881 kb on - strand, within GFF6832 at 18.925 kb on + strand at 18.926 kb on - strand at 19.176 kb on + strand, within GFF6833 at 19.176 kb on + strand, within GFF6833 at 19.176 kb on + strand, within GFF6833 at 19.176 kb on + strand, within GFF6833 at 19.177 kb on - strand, within GFF6833 at 19.177 kb on - strand, within GFF6833 at 19.177 kb on - strand, within GFF6833 at 19.558 kb on + strand, within GFF6834 at 19.558 kb on + strand, within GFF6834 at 19.558 kb on + strand, within GFF6834 at 19.559 kb on - strand, within GFF6834 at 19.603 kb on + strand, within GFF6834 at 19.603 kb on + strand, within GFF6834 at 19.604 kb on - strand, within GFF6834 at 19.604 kb on - strand, within GFF6834 at 19.604 kb on - strand, within GFF6834 at 19.888 kb on + strand at 19.889 kb on - strand at 19.898 kb on + strand at 19.898 kb on + strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.899 kb on - strand at 19.982 kb on + strand, within GFF6835 at 19.982 kb on + strand, within GFF6835 at 19.983 kb on - strand, within GFF6835 at 19.983 kb on - strand, within GFF6835 at 20.012 kb on + strand, within GFF6835 at 20.013 kb on - strand, within GFF6835 at 20.013 kb on - strand, within GFF6835 at 20.240 kb on + strand, within GFF6835 at 20.240 kb on + strand, within GFF6835 at 20.240 kb on + strand, within GFF6835 at 20.240 kb on + strand, within GFF6835 at 20.240 kb on + strand, within GFF6835 at 20.241 kb on - strand, within GFF6835 at 20.241 kb on - strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.414 kb on + strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.415 kb on - strand, within GFF6835 at 20.541 kb on - strand at 20.579 kb on + strand at 20.580 kb on - strand at 20.771 kb on + strand, within GFF6836 at 20.771 kb on + strand, within GFF6836 at 20.771 kb on + strand, within GFF6836 at 20.772 kb on - strand, within GFF6836 at 20.772 kb on - strand, within GFF6836 at 20.772 kb on - strand, within GFF6836 at 20.772 kb on - strand, within GFF6836 at 20.772 kb on - strand, within GFF6836 at 20.772 kb on - strand, within GFF6836 at 20.829 kb on - strand, within GFF6836
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 18,406 + GFF6832 0.40 +0.4 18,406 + GFF6832 0.40 -0.4 18,406 + GFF6832 0.40 +0.0 18,406 + GFF6832 0.40 -0.0 18,406 + GFF6832 0.40 -0.7 18,406 + GFF6832 0.40 -0.2 18,406 + GFF6832 0.40 +0.2 18,407 - GFF6832 0.40 -1.3 18,407 - GFF6832 0.40 -0.3 18,407 - GFF6832 0.40 -0.2 18,407 - GFF6832 0.40 +0.2 18,407 - GFF6832 0.40 -0.1 18,407 - GFF6832 0.40 +0.8 18,643 + GFF6832 0.64 -0.4 18,643 + GFF6832 0.64 -1.5 18,643 + GFF6832 0.64 -0.7 18,644 - GFF6832 0.65 +0.5 18,644 - GFF6832 0.65 -1.7 18,676 + GFF6832 0.68 +0.0 18,676 + GFF6832 0.68 -0.9 18,676 + GFF6832 0.68 +0.8 18,700 + GFF6832 0.70 +0.2 18,700 + GFF6832 0.70 -0.7 18,700 + GFF6832 0.70 +0.2 18,701 - GFF6832 0.71 -1.0 18,701 - GFF6832 0.71 -1.0 18,701 - GFF6832 0.71 -1.1 18,701 - GFF6832 0.71 -1.9 18,701 - GFF6832 0.71 -0.3 18,701 - GFF6832 0.71 -0.3 18,701 - GFF6832 0.71 +0.1 18,868 + GFF6832 0.88 -2.4 18,868 + GFF6832 0.88 -0.1 18,868 + GFF6832 0.88 -0.5 18,868 + GFF6832 0.88 +0.4 18,869 - GFF6832 0.88 +0.5 18,881 - GFF6832 0.89 -0.2 18,925 + -0.3 18,926 - -0.2 19,176 + GFF6833 0.59 -0.1 19,176 + GFF6833 0.59 -0.2 19,176 + GFF6833 0.59 -0.7 19,176 + GFF6833 0.59 +0.0 19,177 - GFF6833 0.60 +0.3 19,177 - GFF6833 0.60 -0.1 19,177 - GFF6833 0.60 +0.9 19,558 + GFF6834 0.36 +0.8 19,558 + GFF6834 0.36 +1.0 19,558 + GFF6834 0.36 +0.1 19,559 - GFF6834 0.36 +0.5 19,603 + GFF6834 0.45 -0.1 19,603 + GFF6834 0.45 +0.6 19,604 - GFF6834 0.46 -0.8 19,604 - GFF6834 0.46 +0.0 19,604 - GFF6834 0.46 -0.4 19,888 + -0.5 19,889 - +0.9 19,898 + -0.1 19,898 + -0.2 19,899 - -0.9 19,899 - -0.3 19,899 - +0.8 19,899 - +0.6 19,899 - +0.7 19,899 - -3.0 19,899 - -1.8 19,899 - -0.3 19,982 + GFF6835 0.11 -1.3 19,982 + GFF6835 0.11 -1.2 19,983 - GFF6835 0.11 -0.3 19,983 - GFF6835 0.11 -0.9 20,012 + GFF6835 0.16 -0.8 20,013 - GFF6835 0.16 -0.2 20,013 - GFF6835 0.16 -0.1 20,240 + GFF6835 0.55 +0.1 20,240 + GFF6835 0.55 -0.4 20,240 + GFF6835 0.55 -0.5 20,240 + GFF6835 0.55 +0.0 20,240 + GFF6835 0.55 -0.4 20,241 - GFF6835 0.55 -0.2 20,241 - GFF6835 0.55 -0.3 20,414 + GFF6835 0.85 -0.4 20,414 + GFF6835 0.85 +0.1 20,414 + GFF6835 0.85 -0.3 20,414 + GFF6835 0.85 -0.3 20,414 + GFF6835 0.85 +0.0 20,414 + GFF6835 0.85 +0.8 20,414 + GFF6835 0.85 -0.4 20,414 + GFF6835 0.85 -0.1 20,414 + GFF6835 0.85 -0.4 20,414 + GFF6835 0.85 -1.0 20,414 + GFF6835 0.85 -0.5 20,414 + GFF6835 0.85 +0.5 20,414 + GFF6835 0.85 -0.5 20,414 + GFF6835 0.85 +0.7 20,415 - GFF6835 0.85 +0.1 20,415 - GFF6835 0.85 -0.4 20,415 - GFF6835 0.85 -0.4 20,415 - GFF6835 0.85 +0.3 20,415 - GFF6835 0.85 -0.3 20,415 - GFF6835 0.85 -0.8 20,415 - GFF6835 0.85 -0.6 20,415 - GFF6835 0.85 -0.5 20,415 - GFF6835 0.85 -0.4 20,415 - GFF6835 0.85 -0.2 20,415 - GFF6835 0.85 -0.5 20,415 - GFF6835 0.85 -0.4 20,415 - GFF6835 0.85 -0.2 20,415 - GFF6835 0.85 +0.2 20,415 - GFF6835 0.85 +0.2 20,415 - GFF6835 0.85 -1.3 20,541 - -0.9 20,579 + +0.2 20,580 - -0.3 20,771 + GFF6836 0.55 -0.3 20,771 + GFF6836 0.55 -0.5 20,771 + GFF6836 0.55 +0.5 20,772 - GFF6836 0.55 +0.7 20,772 - GFF6836 0.55 +0.8 20,772 - GFF6836 0.55 +0.4 20,772 - GFF6836 0.55 +0.5 20,772 - GFF6836 0.55 -0.6 20,772 - GFF6836 0.55 -0.6 20,829 - GFF6836 0.71 -0.3
Or see this region's nucleotide sequence