Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2614 and GFF2615 are separated by 4 nucleotides GFF2615 and GFF2616 are separated by 272 nucleotides GFF2616 and GFF2617 are separated by 10 nucleotides
GFF2614 - no description, at 19,908 to 20,075
GFF2614
GFF2615 - no description, at 20,080 to 20,259
GFF2615
GFF2616 - no description, at 20,532 to 21,017
GFF2616
GFF2617 - no description, at 21,028 to 21,192
GFF2617
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1
2 at 18.915 kb on - strand at 18.960 kb on - strand at 18.960 kb on - strand at 18.960 kb on - strand at 18.960 kb on - strand at 19.016 kb on + strand at 19.016 kb on + strand at 19.016 kb on + strand at 19.017 kb on - strand at 19.017 kb on - strand at 19.044 kb on - strand at 19.058 kb on - strand at 19.063 kb on + strand at 19.105 kb on + strand at 19.105 kb on + strand at 19.105 kb on + strand at 19.106 kb on - strand at 19.106 kb on - strand at 19.106 kb on - strand at 19.112 kb on + strand at 19.112 kb on + strand at 19.113 kb on - strand at 19.113 kb on - strand at 19.113 kb on - strand at 19.113 kb on - strand at 19.139 kb on + strand at 19.139 kb on + strand at 19.312 kb on + strand at 19.359 kb on - strand at 19.393 kb on + strand at 19.393 kb on + strand at 19.393 kb on + strand at 19.393 kb on + strand at 19.394 kb on - strand at 19.394 kb on - strand at 19.394 kb on - strand at 19.394 kb on - strand at 19.422 kb on + strand at 19.422 kb on + strand at 19.422 kb on + strand at 19.423 kb on - strand at 19.423 kb on - strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.464 kb on + strand at 19.464 kb on + strand at 19.464 kb on + strand at 19.464 kb on + strand at 19.465 kb on - strand at 19.465 kb on - strand at 19.465 kb on - strand at 19.465 kb on - strand at 19.485 kb on + strand at 19.485 kb on + strand at 19.486 kb on - strand at 19.505 kb on + strand at 19.505 kb on + strand at 19.506 kb on - strand at 19.506 kb on - strand at 19.506 kb on - strand at 19.506 kb on - strand at 19.509 kb on + strand at 19.509 kb on + strand at 19.510 kb on - strand at 19.510 kb on - strand at 19.614 kb on - strand at 19.614 kb on - strand at 19.614 kb on - strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.625 kb on + strand at 19.625 kb on + strand at 19.626 kb on - strand at 19.626 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.668 kb on - strand at 19.668 kb on - strand at 19.668 kb on - strand at 19.668 kb on - strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.798 kb on + strand at 19.798 kb on + strand at 19.798 kb on + strand at 19.799 kb on - strand at 19.805 kb on + strand at 19.805 kb on + strand at 19.806 kb on - strand at 19.806 kb on - strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.826 kb on - strand at 19.826 kb on - strand at 19.826 kb on - strand at 19.884 kb on + strand at 19.885 kb on - strand at 19.885 kb on - strand at 19.885 kb on - strand at 19.885 kb on - strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.906 kb on + strand at 19.906 kb on + strand at 19.906 kb on + strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.926 kb on - strand, within GFF2614 at 19.942 kb on + strand, within GFF2614 at 19.943 kb on - strand, within GFF2614 at 20.062 kb on + strand at 20.073 kb on + strand at 20.073 kb on + strand at 20.074 kb on - strand at 20.074 kb on - strand at 20.074 kb on - strand at 20.074 kb on - strand at 20.081 kb on + strand at 20.082 kb on - strand at 20.108 kb on + strand, within GFF2615 at 20.173 kb on - strand, within GFF2615 at 20.296 kb on - strand at 20.296 kb on - strand at 20.411 kb on + strand at 20.411 kb on + strand at 20.411 kb on + strand at 20.443 kb on - strand at 20.524 kb on + strand at 20.533 kb on + strand at 20.593 kb on + strand, within GFF2616 at 20.594 kb on - strand, within GFF2616 at 20.594 kb on - strand, within GFF2616 at 20.722 kb on + strand, within GFF2616 at 20.729 kb on + strand, within GFF2616 at 20.729 kb on + strand, within GFF2616 at 20.730 kb on - strand, within GFF2616 at 20.730 kb on - strand, within GFF2616 at 20.731 kb on + strand, within GFF2616 at 20.735 kb on + strand, within GFF2616 at 20.943 kb on + strand, within GFF2616 at 20.944 kb on - strand, within GFF2616 at 21.006 kb on - strand at 21.029 kb on + strand at 21.030 kb on - strand at 21.030 kb on - strand at 21.030 kb on - strand at 21.048 kb on + strand, within GFF2617 at 21.048 kb on + strand, within GFF2617
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 18,915 - +0.1 18,960 - -0.2 18,960 - +1.0 18,960 - +0.0 18,960 - -1.3 19,016 + -0.1 19,016 + -0.2 19,016 + +0.3 19,017 - -0.7 19,017 - +0.8 19,044 - -0.2 19,058 - -0.3 19,063 + -0.1 19,105 + +0.5 19,105 + -0.9 19,105 + +0.2 19,106 - -0.3 19,106 - -0.2 19,106 - -0.6 19,112 + -0.4 19,112 + +0.7 19,113 - +0.2 19,113 - +0.1 19,113 - +0.1 19,113 - +1.0 19,139 + -0.2 19,139 + +0.1 19,312 + +0.3 19,359 - -0.1 19,393 + -1.6 19,393 + +0.5 19,393 + -0.3 19,393 + +0.2 19,394 - +0.1 19,394 - -0.0 19,394 - -0.2 19,394 - -0.1 19,422 + +2.4 19,422 + +0.4 19,422 + -1.2 19,423 - +0.7 19,423 - -0.7 19,462 + +0.7 19,462 + -0.6 19,462 + -0.2 19,462 + -0.6 19,462 + -0.3 19,462 + -0.8 19,463 - +0.4 19,463 - -0.4 19,463 - -0.1 19,463 - -0.1 19,463 - +0.3 19,464 + -0.0 19,464 + +0.1 19,464 + -0.3 19,464 + +0.3 19,465 - +0.1 19,465 - +0.1 19,465 - -0.8 19,465 - +0.0 19,485 + -0.3 19,485 + +0.6 19,486 - -0.7 19,505 + +0.4 19,505 + -0.8 19,506 - -0.8 19,506 - +1.0 19,506 - +0.3 19,506 - -0.2 19,509 + +0.4 19,509 + +0.7 19,510 - -0.1 19,510 - +0.2 19,614 - -0.2 19,614 - -0.7 19,614 - -0.9 19,622 + -0.3 19,622 + +0.3 19,622 + +0.3 19,622 + -1.1 19,622 + +1.3 19,622 + -0.0 19,622 + +1.1 19,622 + +0.3 19,622 + -0.1 19,622 + -0.2 19,622 + -1.3 19,622 + -1.0 19,623 - -1.5 19,623 - -0.1 19,623 - -1.3 19,623 - +0.3 19,623 - -0.6 19,623 - -0.0 19,623 - +0.4 19,623 - -0.4 19,623 - -0.5 19,623 - +0.0 19,623 - -0.4 19,625 + -0.6 19,625 + -0.3 19,626 - -0.4 19,626 - +0.4 19,641 - +0.4 19,641 - -0.5 19,641 - -0.7 19,641 - -0.2 19,641 - +1.5 19,641 - -0.3 19,641 - -1.6 19,668 - -0.2 19,668 - -0.4 19,668 - +0.1 19,668 - -0.9 19,754 + -0.1 19,754 + -2.3 19,754 + +0.7 19,754 + +1.7 19,754 + +0.6 19,754 + -0.6 19,754 + -1.0 19,754 + +0.0 19,754 + +0.4 19,754 + +0.4 19,754 + -0.3 19,754 + -0.1 19,754 + -0.1 19,754 + -0.3 19,754 + -0.6 19,798 + +0.2 19,798 + +0.0 19,798 + +0.0 19,799 - -1.0 19,805 + -0.2 19,805 + -0.1 19,806 - -0.5 19,806 - -0.2 19,825 + -0.3 19,825 + -0.1 19,825 + -0.2 19,825 + -1.3 19,825 + -1.1 19,825 + +0.1 19,825 + -1.2 19,825 + -0.2 19,825 + -0.2 19,825 + +0.7 19,825 + +0.3 19,826 - -0.3 19,826 - +0.1 19,826 - +0.3 19,884 + -1.0 19,885 - +0.0 19,885 - -0.1 19,885 - -0.7 19,885 - -1.0 19,891 + -0.1 19,891 + -0.2 19,891 + +0.1 19,891 + +0.1 19,891 + -0.0 19,891 + -1.5 19,891 + -0.4 19,891 + -0.5 19,891 + +0.1 19,891 + +0.9 19,891 + -0.8 19,891 + -0.3 19,891 + +0.1 19,891 + -0.3 19,891 + -0.9 19,891 + -0.8 19,891 + +0.3 19,892 - -0.3 19,892 - +0.0 19,892 - -1.8 19,892 - -0.1 19,892 - +0.3 19,892 - +0.1 19,892 - -0.3 19,892 - -1.3 19,906 + -0.5 19,906 + -0.8 19,906 + -0.3 19,907 - -0.8 19,907 - +0.7 19,907 - -1.1 19,907 - +0.0 19,907 - +2.3 19,907 - +0.1 19,907 - -0.5 19,926 - GFF2614 0.11 -0.3 19,942 + GFF2614 0.20 -0.5 19,943 - GFF2614 0.21 -0.6 20,062 + -0.7 20,073 + -0.4 20,073 + -0.2 20,074 - -0.6 20,074 - +1.6 20,074 - +0.1 20,074 - -0.5 20,081 + -0.2 20,082 - -0.8 20,108 + GFF2615 0.16 +0.3 20,173 - GFF2615 0.52 +1.2 20,296 - +0.3 20,296 - -0.2 20,411 + -0.0 20,411 + -0.3 20,411 + -0.6 20,443 - -0.4 20,524 + -0.7 20,533 + -1.5 20,593 + GFF2616 0.13 -0.2 20,594 - GFF2616 0.13 -0.4 20,594 - GFF2616 0.13 +0.0 20,722 + GFF2616 0.39 +0.3 20,729 + GFF2616 0.41 -0.2 20,729 + GFF2616 0.41 +0.1 20,730 - GFF2616 0.41 +0.6 20,730 - GFF2616 0.41 -0.5 20,731 + GFF2616 0.41 -0.2 20,735 + GFF2616 0.42 +0.4 20,943 + GFF2616 0.85 -0.8 20,944 - GFF2616 0.85 -0.3 21,006 - -0.1 21,029 + -0.0 21,030 - +0.4 21,030 - +0.1 21,030 - +0.2 21,048 + GFF2617 0.12 -0.8 21,048 + GFF2617 0.12 -0.4
Or see this region's nucleotide sequence