Experiment: FE-G3T (Control flower group 3, top)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02620 and OLJFJH_02625 are separated by 204 nucleotides OLJFJH_02625 and OLJFJH_02630 are separated by 37 nucleotides OLJFJH_02630 and OLJFJH_02635 are separated by 110 nucleotides OLJFJH_02635 and OLJFJH_02640 are separated by 180 nucleotides
OLJFJH_02620: OLJFJH_02620 - C4-dicarboxylate ABC transporter, at 474,449 to 475,750
_02620
OLJFJH_02625: OLJFJH_02625 - protein-disulfide reductase DsbD, at 475,955 to 477,670
_02625
OLJFJH_02630: OLJFJH_02630 - transcriptional regulator, at 477,708 to 478,283
_02630
OLJFJH_02635: OLJFJH_02635 - tRNA-Phe, at 478,394 to 478,469
_02635
OLJFJH_02640: OLJFJH_02640 - site-specific integrase, at 478,650 to 479,663
_02640
Position (kb) 475
476
477
478 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 475.009 kb on + strand, within OLJFJH_02620 at 475.010 kb on - strand, within OLJFJH_02620 at 475.159 kb on - strand, within OLJFJH_02620 at 475.222 kb on + strand, within OLJFJH_02620 at 475.223 kb on - strand, within OLJFJH_02620 at 475.239 kb on + strand, within OLJFJH_02620 at 475.239 kb on + strand, within OLJFJH_02620 at 475.239 kb on + strand, within OLJFJH_02620 at 475.243 kb on + strand, within OLJFJH_02620 at 475.243 kb on + strand, within OLJFJH_02620 at 475.244 kb on - strand, within OLJFJH_02620 at 475.244 kb on - strand, within OLJFJH_02620 at 475.273 kb on + strand, within OLJFJH_02620 at 475.372 kb on + strand, within OLJFJH_02620 at 475.373 kb on - strand, within OLJFJH_02620 at 475.373 kb on - strand, within OLJFJH_02620 at 475.390 kb on + strand, within OLJFJH_02620 at 475.748 kb on + strand at 475.749 kb on - strand at 475.869 kb on + strand at 475.869 kb on + strand at 475.869 kb on + strand at 475.869 kb on + strand at 475.870 kb on - strand at 475.870 kb on - strand at 475.872 kb on + strand at 475.943 kb on + strand at 475.944 kb on - strand at 475.947 kb on + strand at 475.947 kb on + strand at 475.959 kb on + strand at 476.128 kb on - strand, within OLJFJH_02625 at 476.141 kb on + strand, within OLJFJH_02625 at 476.142 kb on - strand, within OLJFJH_02625 at 476.142 kb on - strand, within OLJFJH_02625 at 476.142 kb on - strand, within OLJFJH_02625 at 476.509 kb on + strand, within OLJFJH_02625 at 476.509 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.609 kb on + strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.610 kb on - strand, within OLJFJH_02625 at 476.613 kb on + strand, within OLJFJH_02625 at 476.614 kb on - strand, within OLJFJH_02625 at 476.633 kb on + strand, within OLJFJH_02625 at 476.633 kb on + strand, within OLJFJH_02625 at 476.633 kb on + strand, within OLJFJH_02625 at 476.635 kb on + strand, within OLJFJH_02625 at 476.689 kb on - strand, within OLJFJH_02625 at 476.900 kb on - strand, within OLJFJH_02625 at 476.915 kb on + strand, within OLJFJH_02625 at 476.916 kb on - strand, within OLJFJH_02625 at 476.916 kb on - strand, within OLJFJH_02625 at 476.916 kb on - strand, within OLJFJH_02625 at 476.916 kb on - strand, within OLJFJH_02625 at 476.960 kb on + strand, within OLJFJH_02625 at 476.961 kb on - strand, within OLJFJH_02625 at 476.961 kb on - strand, within OLJFJH_02625 at 476.961 kb on - strand, within OLJFJH_02625 at 476.961 kb on - strand, within OLJFJH_02625 at 477.055 kb on - strand, within OLJFJH_02625 at 477.094 kb on - strand, within OLJFJH_02625 at 477.178 kb on + strand, within OLJFJH_02625 at 477.178 kb on + strand, within OLJFJH_02625 at 477.382 kb on + strand, within OLJFJH_02625 at 477.399 kb on - strand, within OLJFJH_02625 at 477.433 kb on + strand, within OLJFJH_02625 at 477.433 kb on + strand, within OLJFJH_02625 at 477.434 kb on - strand, within OLJFJH_02625 at 477.434 kb on - strand, within OLJFJH_02625 at 477.434 kb on - strand, within OLJFJH_02625 at 477.434 kb on - strand, within OLJFJH_02625 at 477.438 kb on - strand, within OLJFJH_02625 at 477.459 kb on + strand, within OLJFJH_02625 at 477.479 kb on - strand, within OLJFJH_02625 at 477.490 kb on - strand, within OLJFJH_02625 at 477.501 kb on + strand at 477.501 kb on + strand at 477.502 kb on - strand at 477.502 kb on - strand at 477.508 kb on + strand at 477.509 kb on - strand at 477.509 kb on - strand at 477.512 kb on - strand at 477.536 kb on - strand at 477.668 kb on + strand at 477.668 kb on + strand at 477.673 kb on - strand at 477.685 kb on - strand at 477.804 kb on + strand, within OLJFJH_02630 at 477.806 kb on + strand, within OLJFJH_02630 at 477.806 kb on + strand, within OLJFJH_02630 at 477.807 kb on - strand, within OLJFJH_02630 at 477.807 kb on - strand, within OLJFJH_02630 at 477.807 kb on - strand, within OLJFJH_02630 at 477.807 kb on - strand, within OLJFJH_02630 at 478.026 kb on + strand, within OLJFJH_02630 at 478.026 kb on + strand, within OLJFJH_02630 at 478.027 kb on - strand, within OLJFJH_02630 at 478.236 kb on + strand at 478.238 kb on + strand at 478.238 kb on + strand at 478.239 kb on - strand at 478.239 kb on - strand at 478.240 kb on + strand at 478.241 kb on - strand at 478.241 kb on - strand at 478.241 kb on - strand at 478.241 kb on - strand at 478.241 kb on - strand at 478.276 kb on + strand at 478.306 kb on - strand at 478.381 kb on - strand at 478.470 kb on + strand at 478.470 kb on + strand at 478.470 kb on + strand at 478.470 kb on + strand at 478.470 kb on + strand at 478.471 kb on - strand at 478.471 kb on - strand at 478.471 kb on - strand at 478.471 kb on - strand at 478.621 kb on - strand at 478.631 kb on - strand at 478.645 kb on + strand at 478.669 kb on - strand at 478.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction FE-G3T (Control flower group 3, top) remove 475,009 + OLJFJH_02620 0.43 -0.9 475,010 - OLJFJH_02620 0.43 -1.7 475,159 - OLJFJH_02620 0.55 -0.1 475,222 + OLJFJH_02620 0.59 -1.0 475,223 - OLJFJH_02620 0.59 -0.4 475,239 + OLJFJH_02620 0.61 +1.3 475,239 + OLJFJH_02620 0.61 +0.2 475,239 + OLJFJH_02620 0.61 +0.4 475,243 + OLJFJH_02620 0.61 +0.0 475,243 + OLJFJH_02620 0.61 +0.9 475,244 - OLJFJH_02620 0.61 +2.6 475,244 - OLJFJH_02620 0.61 +0.7 475,273 + OLJFJH_02620 0.63 +0.3 475,372 + OLJFJH_02620 0.71 +0.5 475,373 - OLJFJH_02620 0.71 -0.6 475,373 - OLJFJH_02620 0.71 -0.5 475,390 + OLJFJH_02620 0.72 +0.1 475,748 + +0.3 475,749 - +0.3 475,869 + -0.2 475,869 + -0.2 475,869 + -1.2 475,869 + +1.7 475,870 - +1.0 475,870 - -0.2 475,872 + -0.5 475,943 + +0.1 475,944 - -0.3 475,947 + +0.2 475,947 + -1.3 475,959 + -2.0 476,128 - OLJFJH_02625 0.10 -1.4 476,141 + OLJFJH_02625 0.11 -1.1 476,142 - OLJFJH_02625 0.11 +0.2 476,142 - OLJFJH_02625 0.11 -0.7 476,142 - OLJFJH_02625 0.11 -0.3 476,509 + OLJFJH_02625 0.32 -2.3 476,509 + OLJFJH_02625 0.32 -0.9 476,609 + OLJFJH_02625 0.38 -1.3 476,609 + OLJFJH_02625 0.38 -2.1 476,609 + OLJFJH_02625 0.38 -0.4 476,609 + OLJFJH_02625 0.38 +0.9 476,609 + OLJFJH_02625 0.38 -0.0 476,609 + OLJFJH_02625 0.38 -1.5 476,609 + OLJFJH_02625 0.38 -0.7 476,610 - OLJFJH_02625 0.38 -0.2 476,610 - OLJFJH_02625 0.38 -0.2 476,610 - OLJFJH_02625 0.38 -0.9 476,610 - OLJFJH_02625 0.38 +1.2 476,610 - OLJFJH_02625 0.38 -0.9 476,610 - OLJFJH_02625 0.38 +1.4 476,610 - OLJFJH_02625 0.38 -0.4 476,613 + OLJFJH_02625 0.38 -0.5 476,614 - OLJFJH_02625 0.38 -0.5 476,633 + OLJFJH_02625 0.40 -0.5 476,633 + OLJFJH_02625 0.40 -0.3 476,633 + OLJFJH_02625 0.40 -0.6 476,635 + OLJFJH_02625 0.40 -1.1 476,689 - OLJFJH_02625 0.43 +0.0 476,900 - OLJFJH_02625 0.55 -0.5 476,915 + OLJFJH_02625 0.56 -1.9 476,916 - OLJFJH_02625 0.56 -0.9 476,916 - OLJFJH_02625 0.56 -0.9 476,916 - OLJFJH_02625 0.56 -0.6 476,916 - OLJFJH_02625 0.56 -1.5 476,960 + OLJFJH_02625 0.59 -0.1 476,961 - OLJFJH_02625 0.59 -0.3 476,961 - OLJFJH_02625 0.59 -0.5 476,961 - OLJFJH_02625 0.59 -0.1 476,961 - OLJFJH_02625 0.59 -0.6 477,055 - OLJFJH_02625 0.64 -0.6 477,094 - OLJFJH_02625 0.66 -0.8 477,178 + OLJFJH_02625 0.71 -0.4 477,178 + OLJFJH_02625 0.71 -0.5 477,382 + OLJFJH_02625 0.83 -0.1 477,399 - OLJFJH_02625 0.84 -0.8 477,433 + OLJFJH_02625 0.86 +0.2 477,433 + OLJFJH_02625 0.86 -1.4 477,434 - OLJFJH_02625 0.86 -0.3 477,434 - OLJFJH_02625 0.86 -0.1 477,434 - OLJFJH_02625 0.86 -0.8 477,434 - OLJFJH_02625 0.86 +1.2 477,438 - OLJFJH_02625 0.86 -0.9 477,459 + OLJFJH_02625 0.88 +0.1 477,479 - OLJFJH_02625 0.89 +0.2 477,490 - OLJFJH_02625 0.89 -0.9 477,501 + -0.5 477,501 + -0.5 477,502 - -0.3 477,502 - -0.6 477,508 + +0.1 477,509 - -0.5 477,509 - -0.5 477,512 - +4.5 477,536 - -0.0 477,668 + -0.0 477,668 + -1.6 477,673 - +2.0 477,685 - +0.1 477,804 + OLJFJH_02630 0.17 -0.1 477,806 + OLJFJH_02630 0.17 -0.1 477,806 + OLJFJH_02630 0.17 +0.2 477,807 - OLJFJH_02630 0.17 -0.6 477,807 - OLJFJH_02630 0.17 +0.6 477,807 - OLJFJH_02630 0.17 +0.3 477,807 - OLJFJH_02630 0.17 -0.2 478,026 + OLJFJH_02630 0.55 +0.9 478,026 + OLJFJH_02630 0.55 -0.3 478,027 - OLJFJH_02630 0.55 +0.2 478,236 + -0.8 478,238 + +1.4 478,238 + -0.0 478,239 - -0.6 478,239 - -0.4 478,240 + -0.3 478,241 - +0.8 478,241 - +1.1 478,241 - +0.6 478,241 - +0.8 478,241 - -0.3 478,276 + -0.1 478,306 - +0.4 478,381 - -0.5 478,470 + +0.4 478,470 + -0.7 478,470 + -0.0 478,470 + +0.0 478,470 + -0.8 478,471 - -0.7 478,471 - -0.9 478,471 - -0.7 478,471 - +1.9 478,621 - +0.3 478,631 - -0.8 478,645 + -0.1 478,669 - -0.8 478,669 - +0.5
Or see this region's nucleotide sequence