Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06340

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
107,280	+		MPMX19_06338	0.43	-0.3
107,280	+		MPMX19_06338	0.43	-0.6
107,280	+		MPMX19_06338	0.43	+0.3
107,280	+		MPMX19_06338	0.43	-0.8
107,280	+		MPMX19_06338	0.43	+0.5
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	-1.9
107,280	+		MPMX19_06338	0.43	-0.6
107,280	+		MPMX19_06338	0.43	+0.3
107,280	+		MPMX19_06338	0.43	-0.2
107,280	+		MPMX19_06338	0.43	-0.2
107,280	+		MPMX19_06338	0.43	-1.1
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	-2.0
107,280	+		MPMX19_06338	0.43	+0.6
107,280	+		MPMX19_06338	0.43	-2.0
107,280	+		MPMX19_06338	0.43	+0.7
107,280	+		MPMX19_06338	0.43	-0.6
107,280	+		MPMX19_06338	0.43	-1.0
107,280	+		MPMX19_06338	0.43	+1.1
107,280	+		MPMX19_06338	0.43	-1.6
107,280	+		MPMX19_06338	0.43	-0.5
107,280	+		MPMX19_06338	0.43	-0.6
107,280	+		MPMX19_06338	0.43	-0.1
107,281	-		MPMX19_06338	0.43	-1.4
107,281	-		MPMX19_06338	0.43	-0.6
107,281	-		MPMX19_06338	0.43	-1.1
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	+0.1
107,281	-		MPMX19_06338	0.43	-0.9
107,281	-		MPMX19_06338	0.43	+1.1
107,281	-		MPMX19_06338	0.43	-0.1
107,281	-		MPMX19_06338	0.43	+0.4
107,281	-		MPMX19_06338	0.43	-0.2
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	-0.3
107,281	-		MPMX19_06338	0.43	+1.7
107,281	-		MPMX19_06338	0.43	-2.6
107,281	-		MPMX19_06338	0.43	+1.0
107,281	-		MPMX19_06338	0.43	+0.0
107,281	-		MPMX19_06338	0.43	+0.7
107,300	+		MPMX19_06338	0.45	+0.4
107,300	+		MPMX19_06338	0.45	-1.3
107,300	+		MPMX19_06338	0.45	+0.1
107,300	+		MPMX19_06338	0.45	+0.4
107,301	-		MPMX19_06338	0.45	+0.1
107,349	+		MPMX19_06338	0.50	-0.5
107,349	+		MPMX19_06338	0.50	+0.9
107,349	+		MPMX19_06338	0.50	-0.1
107,349	+		MPMX19_06338	0.50	-1.1
107,349	+		MPMX19_06338	0.50	-1.3
107,349	+		MPMX19_06338	0.50	-0.6
107,350	-		MPMX19_06338	0.50	-0.9
107,350	-		MPMX19_06338	0.50	-0.0
107,350	-		MPMX19_06338	0.50	-0.0
107,350	-		MPMX19_06338	0.50	-1.3
107,350	-		MPMX19_06338	0.50	-0.8
107,350	-		MPMX19_06338	0.50	+0.4
107,361	+		MPMX19_06338	0.51	+0.1
107,361	+		MPMX19_06338	0.51	-0.9
107,361	+		MPMX19_06338	0.51	+0.4
107,361	+		MPMX19_06338	0.51	+0.2
107,361	+		MPMX19_06338	0.51	+0.1
107,361	+		MPMX19_06338	0.51	+0.4
107,361	+		MPMX19_06338	0.51	+0.9
107,362	-		MPMX19_06338	0.51	-0.1
107,362	-		MPMX19_06338	0.51	+0.4
107,362	-		MPMX19_06338	0.51	+0.2
107,362	-		MPMX19_06338	0.51	-3.0
107,362	-		MPMX19_06338	0.51	+0.5
107,362	-		MPMX19_06338	0.51	-0.1
107,362	-		MPMX19_06338	0.51	+0.4
107,362	-		MPMX19_06338	0.51	-2.0
107,433	+		MPMX19_06338	0.59	-0.3
107,434	-		MPMX19_06338	0.59	-1.1
107,478	+		MPMX19_06338	0.63	-0.6
107,478	+		MPMX19_06338	0.63	-0.8
107,478	+		MPMX19_06338	0.63	-0.2
107,479	-		MPMX19_06338	0.63	+0.4
107,479	-		MPMX19_06338	0.63	-2.1
107,479	-		MPMX19_06338	0.63	+0.7
107,520	+		MPMX19_06338	0.68	-1.8
107,520	+		MPMX19_06338	0.68	+1.4
107,520	+		MPMX19_06338	0.68	-1.6
107,520	+		MPMX19_06338	0.68	-1.4
107,521	-		MPMX19_06338	0.68	-0.6
107,521	-		MPMX19_06338	0.68	-1.1
107,521	-		MPMX19_06338	0.68	-1.1
107,521	-		MPMX19_06338	0.68	-0.6
107,521	-		MPMX19_06338	0.68	+0.6
107,521	-		MPMX19_06338	0.68	-0.5
107,521	-		MPMX19_06338	0.68	-0.9
107,547	+		MPMX19_06338	0.70	-0.0
107,547	+		MPMX19_06338	0.70	-1.8
107,547	+		MPMX19_06338	0.70	+0.5
107,547	+		MPMX19_06338	0.70	-1.1
107,547	+		MPMX19_06338	0.70	-1.1
107,547	+		MPMX19_06338	0.70	-0.3
107,698	+		MPMX19_06338	0.86	-0.4
107,699	-		MPMX19_06338	0.86	-0.8
107,699	-		MPMX19_06338	0.86	-0.2
107,699	-		MPMX19_06338	0.86	+0.1
107,805	+				+0.9
107,805	+				+0.2
107,805	+				-0.1
108,087	+				-0.9
108,087	+				-0.3
108,088	-				-0.8
108,088	-				-1.6
108,130	+				-1.2
108,130	+				-1.0
108,172	+				-1.5
108,172	+				-0.1
108,173	-				+0.7
108,173	-				+0.2
108,173	-				-0.3
108,173	-				+0.1
108,175	+				-0.5
108,175	+				+1.9
108,319	+		MPMX19_06340	0.37	+1.0
108,319	+		MPMX19_06340	0.37	+0.6
108,320	-		MPMX19_06340	0.37	-2.1
108,344	+		MPMX19_06340	0.53	+0.1
108,344	+		MPMX19_06340	0.53	+0.1
108,345	-		MPMX19_06340	0.54	-0.5
108,345	-		MPMX19_06340	0.54	+0.4
108,345	-		MPMX19_06340	0.54	-0.4
108,348	+		MPMX19_06340	0.56	+0.3
108,349	-		MPMX19_06340	0.57	+0.2
108,485	+				-0.9
108,485	+				-0.0
108,485	+				-2.0
108,486	-				+0.5
108,486	-				-1.5
108,606	+		MPMX19_06341	0.34	+0.1
108,606	+		MPMX19_06341	0.34	-0.7
108,606	+		MPMX19_06341	0.34	+0.0
108,606	+		MPMX19_06341	0.34	-0.9
108,606	+		MPMX19_06341	0.34	-1.2
108,606	+		MPMX19_06341	0.34	-0.3
108,606	+		MPMX19_06341	0.34	+2.2
108,606	+		MPMX19_06341	0.34	-1.8
108,607	-		MPMX19_06341	0.34	-0.2
108,607	-		MPMX19_06341	0.34	+1.1
108,607	-		MPMX19_06341	0.34	-1.2
108,607	-		MPMX19_06341	0.34	+0.4
108,607	-		MPMX19_06341	0.34	-0.1
108,607	-		MPMX19_06341	0.34	-0.9
108,607	-		MPMX19_06341	0.34	-0.7
108,607	-		MPMX19_06341	0.34	-0.1
108,825	-				-0.8
108,832	-				-1.1
108,855	+				-1.1
108,855	+				-2.0
108,859	+				+0.7
108,879	-				-1.5
108,879	-				+1.4
108,934	-				+0.1
108,987	+				-0.3
108,988	-				+0.7
108,988	-				-0.5
109,011	+		MPMX19_06342	0.11	+0.6
109,011	+		MPMX19_06342	0.11	+0.1
109,011	+		MPMX19_06342	0.11	-0.4
109,011	+		MPMX19_06342	0.11	-0.0
109,012	-		MPMX19_06342	0.11	+1.2
109,136	+		MPMX19_06342	0.57	-0.3
109,136	+		MPMX19_06342	0.57	-0.6
109,136	+		MPMX19_06342	0.57	+0.1
109,136	+		MPMX19_06342	0.57	-1.3
109,136	+		MPMX19_06342	0.57	-1.3
109,136	+		MPMX19_06342	0.57	-0.4
109,136	+		MPMX19_06342	0.57	-0.9
109,136	+		MPMX19_06342	0.57	+0.9
109,136	+		MPMX19_06342	0.57	-0.6
109,136	+		MPMX19_06342	0.57	+1.0
109,136	+		MPMX19_06342	0.57	-0.3
109,136	+		MPMX19_06342	0.57	-0.1
109,137	-		MPMX19_06342	0.57	+0.1
109,137	-		MPMX19_06342	0.57	-1.1
109,137	-		MPMX19_06342	0.57	+0.6
109,137	-		MPMX19_06342	0.57	-1.1
109,137	-		MPMX19_06342	0.57	-1.6
109,137	-		MPMX19_06342	0.57	-1.4
109,137	-		MPMX19_06342	0.57	-1.5
109,137	-		MPMX19_06342	0.57	-1.0
109,137	-		MPMX19_06342	0.57	-0.9
109,137	-		MPMX19_06342	0.57	-0.1
109,137	-		MPMX19_06342	0.57	+0.5
109,137	-		MPMX19_06342	0.57	-0.7
109,186	+		MPMX19_06342	0.76	-0.0
109,186	+		MPMX19_06342	0.76	+2.2
109,186	+		MPMX19_06342	0.76	+0.4
109,186	+		MPMX19_06342	0.76	-1.5
109,186	+		MPMX19_06342	0.76	-0.0
109,186	+		MPMX19_06342	0.76	+0.9
109,186	+		MPMX19_06342	0.76	-0.6
109,186	+		MPMX19_06342	0.76	+0.2
109,186	+		MPMX19_06342	0.76	+0.7
109,186	+		MPMX19_06342	0.76	-0.1
109,186	+		MPMX19_06342	0.76	-1.8
109,186	+		MPMX19_06342	0.76	+0.7
109,186	+		MPMX19_06342	0.76	-0.2
109,186	+		MPMX19_06342	0.76	+0.2
109,186	+		MPMX19_06342	0.76	-0.3
109,186	+		MPMX19_06342	0.76	-1.3
109,186	+		MPMX19_06342	0.76	-0.5
109,186	+		MPMX19_06342	0.76	-0.8
109,186	+		MPMX19_06342	0.76	-1.5
109,187	-		MPMX19_06342	0.76	-0.6
109,187	-		MPMX19_06342	0.76	-2.3
109,187	-		MPMX19_06342	0.76	-0.2
109,187	-		MPMX19_06342	0.76	-0.4
109,187	-		MPMX19_06342	0.76	-1.3
109,187	-		MPMX19_06342	0.76	-0.5
109,187	-		MPMX19_06342	0.76	-0.3
109,187	-		MPMX19_06342	0.76	-0.0
109,187	-		MPMX19_06342	0.76	+0.1
109,188	+		MPMX19_06342	0.76	-0.3
109,188	+		MPMX19_06342	0.76	+0.5
109,188	+		MPMX19_06342	0.76	+0.1
109,188	+		MPMX19_06342	0.76	-0.2
109,189	-		MPMX19_06342	0.77	-0.6
109,189	-		MPMX19_06342	0.77	-1.9
109,189	-		MPMX19_06342	0.77	-0.9
109,189	-		MPMX19_06342	0.77	-0.6
109,189	-		MPMX19_06342	0.77	+0.2
109,249	+				-0.5
109,250	-				+1.1
109,342	+				-1.3
109,342	+				-0.6
109,342	+				-0.5
109,342	+				+1.2
109,342	+				-0.6
109,342	+				+0.5
109,342	+				+0.5
109,343	-				-0.2
109,343	-				-0.4
109,343	-				+0.7
109,343	-				-0.6
109,343	-				-1.4
109,343	-				-0.1