Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02680

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,798,855	+				-0.4
2,798,856	-				-0.2
2,798,856	-				+0.5
2,798,857	+				-1.1
2,798,857	+				-0.1
2,798,858	-				+0.0
2,798,858	-				-0.3
2,798,862	+				+0.3
2,798,862	+				-1.3
2,798,863	-				+0.9
2,798,883	-				-1.1
2,798,915	-				-0.9
2,799,057	+				+0.4
2,799,057	+				-0.0
2,799,057	+				+0.2
2,799,057	+				+0.7
2,799,058	-				-1.0
2,799,228	+		MPMX19_02679	0.33	-1.5
2,799,228	+		MPMX19_02679	0.33	-0.6
2,799,228	+		MPMX19_02679	0.33	-1.1
2,799,228	+		MPMX19_02679	0.33	-1.8
2,799,228	+		MPMX19_02679	0.33	-0.4
2,799,228	+		MPMX19_02679	0.33	+0.1
2,799,228	+		MPMX19_02679	0.33	-1.6
2,799,229	-		MPMX19_02679	0.34	+0.1
2,799,229	-		MPMX19_02679	0.34	-0.4
2,799,229	-		MPMX19_02679	0.34	-1.1
2,799,229	-		MPMX19_02679	0.34	-0.6
2,799,229	-		MPMX19_02679	0.34	-1.1
2,799,526	+				-0.8
2,799,526	+				-0.9
2,799,526	+				+1.3
2,799,526	+				-0.6
2,799,527	-				-1.5
2,799,527	-				+0.2
2,799,527	-				+0.5
2,799,527	-				-1.1
2,799,527	-				+2.0
2,799,527	-				-0.6
2,799,527	-				-0.7
2,799,527	-				+0.1
2,799,546	+				-0.5
2,799,546	+				-0.3
2,799,548	+				-1.6
2,799,548	+				-0.7
2,799,548	+				+0.9
2,799,549	-				+0.6
2,799,549	-				+0.4
2,799,565	+				-0.2
2,799,565	+				+0.0
2,799,566	-				+0.4
2,799,591	+				-0.1
2,800,076	+		MPMX19_02680	0.58	-1.6
2,800,076	+		MPMX19_02680	0.58	+1.2
2,800,076	+		MPMX19_02680	0.58	-0.3
2,800,076	+		MPMX19_02680	0.58	+0.7
2,800,076	+		MPMX19_02680	0.58	+0.6
2,800,076	+		MPMX19_02680	0.58	-0.7
2,800,076	+		MPMX19_02680	0.58	-0.3
2,800,077	-		MPMX19_02680	0.58	-0.6
2,800,077	-		MPMX19_02680	0.58	-0.5
2,800,077	-		MPMX19_02680	0.58	-2.2
2,800,077	-		MPMX19_02680	0.58	+0.1
2,800,077	-		MPMX19_02680	0.58	-1.8
2,800,077	-		MPMX19_02680	0.58	+1.9
2,800,077	-		MPMX19_02680	0.58	-0.2
2,800,106	+		MPMX19_02680	0.62	+0.3
2,800,106	+		MPMX19_02680	0.62	+0.3
2,800,106	+		MPMX19_02680	0.62	-0.3
2,800,106	+		MPMX19_02680	0.62	+1.9
2,800,106	+		MPMX19_02680	0.62	-0.8
2,800,106	+		MPMX19_02680	0.62	-0.0
2,800,107	-		MPMX19_02680	0.62	-1.3
2,800,107	-		MPMX19_02680	0.62	-0.5
2,800,107	-		MPMX19_02680	0.62	-1.1
2,800,107	-		MPMX19_02680	0.62	-1.1
2,800,107	-		MPMX19_02680	0.62	-1.9
2,800,107	-		MPMX19_02680	0.62	-1.3
2,800,107	-		MPMX19_02680	0.62	+1.7
2,800,107	-		MPMX19_02680	0.62	-2.5
2,800,214	+		MPMX19_02680	0.76	-1.6
2,800,214	+		MPMX19_02680	0.76	-1.1
2,800,214	+		MPMX19_02680	0.76	-1.1
2,800,214	+		MPMX19_02680	0.76	-0.0
2,800,215	-		MPMX19_02680	0.76	-0.8
2,800,215	-		MPMX19_02680	0.76	-0.2
2,800,215	-		MPMX19_02680	0.76	-0.9
2,800,215	-		MPMX19_02680	0.76	+0.3
2,800,394	+				-1.8
2,800,394	+				-1.3
2,800,394	+				+0.5
2,800,394	+				+0.1
2,800,394	+				-0.1
2,800,394	+				-2.2
2,800,394	+				-0.6
2,800,395	-				+0.8
2,800,395	-				+0.4
2,800,395	-				-0.1
2,800,395	-				-0.8
2,800,395	-				-1.3
2,800,395	-				-0.4
2,800,395	-				-1.2
2,800,395	-				-0.1
2,800,395	-				-0.9
2,800,527	+				-1.8
2,800,527	+				+1.7
2,800,527	+				-2.3
2,800,527	+				-0.4
2,800,527	+				-1.0
2,800,527	+				-1.6
2,800,527	+				+0.3
2,800,527	+				-0.8
2,800,527	+				-0.3
2,800,528	-				+1.1
2,800,528	-				+0.1
2,800,528	-				+0.5
2,800,528	-				-0.5
2,800,528	-				-0.2
2,800,528	-				-1.1
2,800,528	-				+1.2
2,800,528	-				-0.9
2,800,528	-				+0.3
2,800,528	-				-0.1
2,800,539	+				+0.3
2,800,540	-				-0.5
2,800,540	-				-0.8
2,800,540	-				-0.3
2,800,540	-				-2.4
2,800,660	+		MPMX19_02681	0.24	-1.1
2,800,660	+		MPMX19_02681	0.24	+0.4
2,800,660	+		MPMX19_02681	0.24	+0.1
2,800,660	+		MPMX19_02681	0.24	-0.1
2,800,728	+		MPMX19_02681	0.33	-0.2
2,800,728	+		MPMX19_02681	0.33	+1.1
2,800,728	+		MPMX19_02681	0.33	-1.6
2,800,728	+		MPMX19_02681	0.33	-0.6
2,800,728	+		MPMX19_02681	0.33	-1.0
2,800,728	+		MPMX19_02681	0.33	-1.1
2,800,728	+		MPMX19_02681	0.33	+0.6
2,800,728	+		MPMX19_02681	0.33	+0.0
2,800,728	+		MPMX19_02681	0.33	-1.6
2,800,728	+		MPMX19_02681	0.33	+0.7
2,800,728	+		MPMX19_02681	0.33	-1.9
2,800,728	+		MPMX19_02681	0.33	-0.6
2,800,728	+		MPMX19_02681	0.33	-1.6
2,800,728	+		MPMX19_02681	0.33	+0.9
2,800,728	+		MPMX19_02681	0.33	-0.6
2,800,728	+		MPMX19_02681	0.33	-0.9
2,800,728	+		MPMX19_02681	0.33	+0.2
2,800,728	+		MPMX19_02681	0.33	-0.9
2,800,728	+		MPMX19_02681	0.33	+0.1
2,800,729	-		MPMX19_02681	0.33	-1.1
2,800,729	-		MPMX19_02681	0.33	-1.9
2,800,729	-		MPMX19_02681	0.33	-0.8
2,800,729	-		MPMX19_02681	0.33	+0.2
2,800,729	-		MPMX19_02681	0.33	-0.5
2,800,729	-		MPMX19_02681	0.33	+0.1
2,800,729	-		MPMX19_02681	0.33	-0.3
2,800,729	-		MPMX19_02681	0.33	-1.6
2,800,729	-		MPMX19_02681	0.33	-0.3
2,800,729	-		MPMX19_02681	0.33	+0.4
2,800,729	-		MPMX19_02681	0.33	-0.1
2,800,729	-		MPMX19_02681	0.33	+0.4
2,800,729	-		MPMX19_02681	0.33	-0.9
2,800,729	-		MPMX19_02681	0.33	-0.9
2,800,729	-		MPMX19_02681	0.33	+0.4
2,800,740	+		MPMX19_02681	0.35	-3.0
2,800,740	+		MPMX19_02681	0.35	+1.3
2,800,740	+		MPMX19_02681	0.35	+0.5
2,800,740	+		MPMX19_02681	0.35	-0.1
2,800,740	+		MPMX19_02681	0.35	+0.1
2,800,740	+		MPMX19_02681	0.35	+0.2
2,800,740	+		MPMX19_02681	0.35	-0.5
2,800,740	+		MPMX19_02681	0.35	-0.6
2,800,740	+		MPMX19_02681	0.35	-1.2
2,800,740	+		MPMX19_02681	0.35	+0.0
2,800,740	+		MPMX19_02681	0.35	-0.4
2,800,740	+		MPMX19_02681	0.35	+0.7
2,800,740	+		MPMX19_02681	0.35	-1.1
2,800,740	+		MPMX19_02681	0.35	-1.0
2,800,740	+		MPMX19_02681	0.35	+0.1
2,800,740	+		MPMX19_02681	0.35	-1.5
2,800,740	+		MPMX19_02681	0.35	+0.9
2,800,741	-		MPMX19_02681	0.35	-0.3
2,800,741	-		MPMX19_02681	0.35	-1.6
2,800,741	-		MPMX19_02681	0.35	+1.3
2,800,741	-		MPMX19_02681	0.35	-1.3
2,800,741	-		MPMX19_02681	0.35	-1.5
2,800,741	-		MPMX19_02681	0.35	-0.8
2,800,741	-		MPMX19_02681	0.35	-1.5
2,800,741	-		MPMX19_02681	0.35	+0.0
2,800,741	-		MPMX19_02681	0.35	+1.1
2,800,741	-		MPMX19_02681	0.35	+0.6
2,800,749	+		MPMX19_02681	0.36	-0.3
2,800,749	+		MPMX19_02681	0.36	-0.8
2,800,749	+		MPMX19_02681	0.36	+0.2
2,800,750	-		MPMX19_02681	0.36	-0.5
2,800,750	-		MPMX19_02681	0.36	-0.6
2,800,750	-		MPMX19_02681	0.36	-0.1
2,800,833	+		MPMX19_02681	0.47	-0.3
2,800,833	+		MPMX19_02681	0.47	-2.1
2,800,833	+		MPMX19_02681	0.47	-1.8
2,800,833	+		MPMX19_02681	0.47	-0.2
2,800,833	+		MPMX19_02681	0.47	-1.6
2,800,833	+		MPMX19_02681	0.47	-1.5
2,800,833	+		MPMX19_02681	0.47	-1.1
2,800,834	-		MPMX19_02681	0.47	-2.1
2,800,834	-		MPMX19_02681	0.47	-1.1
2,800,834	-		MPMX19_02681	0.47	+0.1
2,800,834	-		MPMX19_02681	0.47	-0.1
2,800,834	-		MPMX19_02681	0.47	-0.3
2,800,834	-		MPMX19_02681	0.47	-0.5
2,800,834	-		MPMX19_02681	0.47	-0.7
2,800,834	-		MPMX19_02681	0.47	+1.5
2,800,834	-		MPMX19_02681	0.47	+0.1
2,800,918	-		MPMX19_02681	0.58	-1.8
2,800,923	+		MPMX19_02681	0.58	-0.1
2,800,923	+		MPMX19_02681	0.58	+0.4
2,800,923	+		MPMX19_02681	0.58	-1.2
2,800,923	+		MPMX19_02681	0.58	-2.8
2,800,923	+		MPMX19_02681	0.58	-0.2
2,800,923	+		MPMX19_02681	0.58	+0.7
2,800,923	+		MPMX19_02681	0.58	-1.2
2,800,923	+		MPMX19_02681	0.58	-0.2
2,800,923	+		MPMX19_02681	0.58	-1.9
2,800,923	+		MPMX19_02681	0.58	-0.5
2,800,980	-		MPMX19_02681	0.66	-0.8
2,801,005	-		MPMX19_02681	0.69	+1.7
2,801,020	-		MPMX19_02681	0.71	-1.1
2,801,020	-		MPMX19_02681	0.71	-0.3
2,801,020	-		MPMX19_02681	0.71	+0.8
2,801,020	-		MPMX19_02681	0.71	-2.5
2,801,100	+		MPMX19_02681	0.81	+0.9
2,801,100	+		MPMX19_02681	0.81	+0.4
2,801,100	+		MPMX19_02681	0.81	-0.3
2,801,100	+		MPMX19_02681	0.81	+0.2
2,801,100	+		MPMX19_02681	0.81	-0.7
2,801,100	+		MPMX19_02681	0.81	-0.5
2,801,101	-		MPMX19_02681	0.82	-0.2
2,801,101	-		MPMX19_02681	0.82	-0.8
2,801,101	-		MPMX19_02681	0.82	+0.1
2,801,101	-		MPMX19_02681	0.82	-0.3
2,801,101	-		MPMX19_02681	0.82	-1.1
2,801,282	-				-1.0
2,801,282	-				-1.4
2,801,282	-				+0.1
2,801,282	-				-0.8
2,801,282	-				-2.3
2,801,282	-				+1.1
2,801,282	-				-0.1
2,801,282	-				-0.5
2,801,282	-				-0.1
2,801,282	-				-0.4
2,801,374	+		MPMX19_02682	0.24	-0.5
2,801,374	+		MPMX19_02682	0.24	+0.7
2,801,374	+		MPMX19_02682	0.24	+0.1
2,801,374	+		MPMX19_02682	0.24	-0.5
2,801,374	+		MPMX19_02682	0.24	+1.0
2,801,374	+		MPMX19_02682	0.24	-1.5
2,801,374	+		MPMX19_02682	0.24	-0.7
2,801,374	+		MPMX19_02682	0.24	-0.0
2,801,374	+		MPMX19_02682	0.24	-0.2
2,801,374	+		MPMX19_02682	0.24	+0.5
2,801,374	+		MPMX19_02682	0.24	+0.1
2,801,374	+		MPMX19_02682	0.24	+0.9
2,801,374	+		MPMX19_02682	0.24	-0.5
2,801,374	+		MPMX19_02682	0.24	+0.1
2,801,374	+		MPMX19_02682	0.24	+1.0
2,801,374	+		MPMX19_02682	0.24	+0.1
2,801,374	+		MPMX19_02682	0.24	-1.4
2,801,374	+		MPMX19_02682	0.24	-0.8
2,801,374	+		MPMX19_02682	0.24	+0.3
2,801,374	+		MPMX19_02682	0.24	-1.1
2,801,374	+		MPMX19_02682	0.24	+0.2
2,801,374	+		MPMX19_02682	0.24	-0.6
2,801,374	+		MPMX19_02682	0.24	-1.4
2,801,374	+		MPMX19_02682	0.24	-0.4
2,801,374	+		MPMX19_02682	0.24	+0.4
2,801,374	+		MPMX19_02682	0.24	-0.6
2,801,375	-		MPMX19_02682	0.24	-0.5
2,801,375	-		MPMX19_02682	0.24	-0.9
2,801,375	-		MPMX19_02682	0.24	-0.3
2,801,375	-		MPMX19_02682	0.24	+2.0
2,801,375	-		MPMX19_02682	0.24	-1.1
2,801,375	-		MPMX19_02682	0.24	-1.0
2,801,375	-		MPMX19_02682	0.24	+0.0
2,801,375	-		MPMX19_02682	0.24	+0.1
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	-0.4
2,801,375	-		MPMX19_02682	0.24	-1.3
2,801,375	-		MPMX19_02682	0.24	-0.5
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	-0.4
2,801,375	-		MPMX19_02682	0.24	-1.1
2,801,375	-		MPMX19_02682	0.24	+0.4
2,801,375	-		MPMX19_02682	0.24	-0.3
2,801,375	-		MPMX19_02682	0.24	+0.2
2,801,375	-		MPMX19_02682	0.24	-0.6
2,801,375	-		MPMX19_02682	0.24	-2.0
2,801,375	-		MPMX19_02682	0.24	-0.5
2,801,375	-		MPMX19_02682	0.24	-0.4
2,801,375	-		MPMX19_02682	0.24	+0.4
2,801,375	-		MPMX19_02682	0.24	-2.3
2,801,375	-		MPMX19_02682	0.24	+0.1
2,801,375	-		MPMX19_02682	0.24	-1.1
2,801,375	-		MPMX19_02682	0.24	+1.7
2,801,375	-		MPMX19_02682	0.24	+0.7