Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02654

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,769,765	+				+1.7
2,769,765	+				+0.4
2,769,774	+				+1.5
2,769,774	+				+0.9
2,769,774	+				-0.4
2,769,774	+				-0.2
2,769,774	+				-0.5
2,769,775	-				-0.6
2,769,775	-				-0.5
2,769,775	-				-0.9
2,769,797	+				-1.3
2,769,797	+				-0.6
2,769,798	-				+0.2
2,769,798	-				-1.8
2,769,798	-				+0.8
2,769,798	-				-1.1
2,769,798	-				-0.1
2,769,798	-				-0.3
2,769,830	+				-1.1
2,769,830	+				-1.1
2,769,830	+				-0.1
2,769,830	+				-0.7
2,769,830	+				-1.2
2,769,830	+				+0.1
2,769,831	-				-0.2
2,769,831	-				-0.1
2,769,831	-				+0.6
2,769,831	-				-0.6
2,769,831	-				-2.4
2,769,831	-				-1.5
2,769,831	-				+0.6
2,769,832	+				+0.8
2,769,832	+				+0.1
2,769,832	+				+1.7
2,769,832	+				-0.2
2,769,832	+				-1.7
2,769,832	+				-0.3
2,769,833	-				-1.2
2,769,833	-				-0.2
2,769,833	-				-0.4
2,769,833	-				-1.3
2,769,833	-				-1.1
2,769,833	-				-3.1
2,769,833	-				-1.0
2,769,833	-				-2.5
2,769,833	-				+0.1
2,769,833	-				-3.0
2,769,833	-				-0.2
2,769,858	+				+1.2
2,769,858	+				-2.8
2,769,858	+				-0.8
2,769,858	+				-2.1
2,769,859	-				-0.3
2,769,859	-				-0.4
2,769,859	-				-0.9
2,769,859	-				-0.9
2,769,859	-				+0.9
2,769,859	-				-0.3
2,769,859	-				+0.4
2,769,859	-				-0.0
2,769,859	-				+0.9
2,769,859	-				-1.1
2,769,859	-				+1.2
2,769,859	-				-0.8
2,769,859	-				-2.3
2,769,859	-				-0.9
2,769,981	+				+0.7
2,769,981	+				+1.1
2,769,981	+				-0.0
2,769,981	+				-1.8
2,769,981	+				-0.9
2,769,981	+				-0.9
2,769,982	-				-0.3
2,769,982	-				-1.0
2,769,982	-				-0.4
2,769,982	-				+1.0
2,769,983	+				-1.3
2,769,983	+				-0.7
2,769,983	+				+0.3
2,769,984	-				-0.2
2,769,984	-				-0.8
2,770,022	+				+1.9
2,770,022	+				+0.7
2,770,022	+				-0.1
2,770,022	+				-0.7
2,770,022	+				-0.7
2,770,022	+				-0.9
2,770,023	-				-1.1
2,770,023	-				-1.9
2,770,023	-				-1.1
2,770,023	-				+0.5
2,770,023	-				-1.9
2,770,023	-				+0.4
2,770,023	-				+0.2
2,770,023	-				-0.3
2,770,023	-				-0.5
2,770,023	-				-1.2
2,770,023	-				-0.6
2,770,023	-				-1.8
2,770,023	-				+1.7
2,770,024	+				+0.2
2,770,024	+				-0.6
2,770,024	+				+0.7
2,770,024	+				-3.0
2,770,024	+				+0.8
2,770,024	+				-1.0
2,770,024	+				+1.2
2,770,024	+				-0.9
2,770,024	+				+0.2
2,770,024	+				-0.9
2,770,024	+				-0.4
2,770,025	-				-1.5
2,770,025	-				-1.3
2,770,025	-				-0.1
2,770,025	-				+0.3
2,770,025	-				+0.4
2,770,069	+				+1.3
2,770,117	+				-1.4
2,770,117	+				-0.2
2,770,117	+				+0.7
2,770,117	+				-0.5
2,770,117	+				-0.3
2,770,117	+				-0.6
2,770,117	+				+0.1
2,770,117	+				-0.1
2,770,117	+				-0.5
2,770,117	+				-0.2
2,770,117	+				-0.3
2,770,117	+				+1.1
2,770,117	+				+1.2
2,770,117	+				+0.1
2,770,117	+				-1.1
2,770,117	+				+0.5
2,770,117	+				-0.3
2,770,118	-				-0.9
2,770,118	-				-0.4
2,770,118	-				-1.8
2,770,118	-				-1.1
2,770,118	-				-2.0
2,770,118	-				+0.2
2,770,118	-				-0.6
2,770,118	-				-1.3
2,770,118	-				-0.2
2,770,118	-				+0.2
2,770,118	-				+0.8
2,770,118	-				+0.7
2,770,118	-				+0.2
2,770,118	-				-0.6
2,770,118	-				-3.1
2,770,118	-				+0.1
2,770,118	-				+0.7
2,770,118	-				-0.8
2,770,118	-				+0.1
2,770,118	-				+0.3
2,770,118	-				+0.6
2,770,118	-				-0.0
2,770,118	-				-1.8
2,770,118	-				+0.8
2,770,118	-				-0.1
2,770,118	-				+1.7
2,770,118	-				-1.1
2,770,120	+				+0.1
2,770,120	+				-1.0
2,770,120	+				+0.7
2,770,121	-				-0.3
2,770,121	-				+0.8
2,770,121	-				-0.4
2,770,121	-				+0.7
2,770,121	-				-1.0
2,770,121	-				-0.7
2,770,121	-				-0.1
2,770,181	+				-1.2
2,770,182	-				+0.3
2,770,182	-				+1.0
2,770,198	+				-2.6
2,770,199	-				+1.0
2,770,236	+				-2.0
2,770,243	-				+0.7
2,770,269	+				+0.9
2,770,328	+				-0.4
2,770,328	+				-1.1
2,770,328	+				+0.0
2,770,328	+				-1.2
2,770,328	+				-0.3
2,770,329	-				-1.0
2,770,329	-				-1.6
2,770,329	-				-1.6
2,770,329	-				-1.6
2,770,329	-				-0.6
2,770,329	-				+0.7
2,770,339	+				+1.0
2,770,339	+				-0.4
2,770,434	+				+0.4
2,770,435	-				-1.3
2,770,493	-				+0.1
2,770,493	-				+0.1
2,770,497	+				-1.4
2,770,497	+				-1.9
2,770,497	+				-1.1
2,770,497	+				+0.1
2,770,497	+				-0.8
2,770,497	+				-0.3
2,770,497	+				-0.6
2,770,498	-				-0.7
2,770,498	-				-1.1
2,770,498	-				-0.6
2,770,498	-				-0.9
2,770,501	+				-0.4
2,770,627	+				+0.1
2,770,627	+				-1.3
2,770,627	+				-1.9
2,770,627	+				-0.2
2,770,627	+				-1.2
2,770,627	+				-0.2
2,770,627	+				-1.5
2,770,627	+				-0.1
2,770,628	-				+0.5
2,770,628	-				+2.1
2,770,628	-				-0.4
2,770,628	-				-0.5
2,770,628	-				-1.0
2,770,628	-				-1.3
2,770,847	+		MPMX19_02654	0.33	-1.8
2,770,847	+		MPMX19_02654	0.33	-0.9
2,770,847	+		MPMX19_02654	0.33	-0.4
2,770,847	+		MPMX19_02654	0.33	-0.2
2,770,847	+		MPMX19_02654	0.33	-1.9
2,770,848	-		MPMX19_02654	0.33	-0.6
2,770,848	-		MPMX19_02654	0.33	+0.0
2,770,848	-		MPMX19_02654	0.33	+1.0
2,770,848	-		MPMX19_02654	0.33	-2.9
2,770,949	+		MPMX19_02654	0.48	+0.6
2,770,949	+		MPMX19_02654	0.48	-0.3
2,770,950	-		MPMX19_02654	0.48	-1.1
2,771,031	+		MPMX19_02654	0.60	+0.5
2,771,200	+		MPMX19_02654	0.85	-0.8
2,771,200	+		MPMX19_02654	0.85	-0.9
2,771,201	-		MPMX19_02654	0.85	-2.4
2,771,222	+		MPMX19_02654	0.88	-0.8
2,771,222	+		MPMX19_02654	0.88	-0.6
2,771,222	+		MPMX19_02654	0.88	-0.4
2,771,222	+		MPMX19_02654	0.88	-1.1
2,771,223	-		MPMX19_02654	0.88	-0.5
2,771,223	-		MPMX19_02654	0.88	-0.3
2,771,223	-		MPMX19_02654	0.88	+2.1
2,771,247	+				-0.9
2,771,247	+				-0.4
2,771,247	+				-1.5
2,771,247	+				-0.0
2,771,247	+				-0.5
2,771,247	+				-0.9
2,771,247	+				+0.4
2,771,247	+				-2.4
2,771,247	+				+0.4
2,771,248	-				-1.2
2,771,248	-				-0.8
2,771,248	-				-0.1
2,771,248	-				-1.5
2,771,248	-				-0.4
2,771,248	-				-0.5
2,771,248	-				-0.0
2,771,248	-				-0.3
2,771,248	-				+1.1
2,771,248	-				-1.2
2,771,272	+				-0.0
2,771,320	+				+0.1
2,771,320	+				-2.0
2,771,320	+				-1.5
2,771,320	+				-0.7
2,771,320	+				+0.5
2,771,320	+				-0.2
2,771,320	+				-0.5
2,771,320	+				-1.1
2,771,320	+				-1.6
2,771,320	+				-0.0
2,771,320	+				-0.0
2,771,320	+				-0.5
2,771,320	+				+1.0
2,771,321	-				-1.6
2,771,321	-				-1.0
2,771,321	-				+0.1
2,771,321	-				-0.1
2,771,321	-				-0.7
2,771,321	-				-0.5
2,771,321	-				+0.0
2,771,321	-				-0.1
2,771,321	-				+0.3
2,771,321	-				-0.4
2,771,321	-				-0.4
2,771,321	-				+0.9
2,771,321	-				-0.9
2,771,321	-				-0.3
2,771,321	-				+0.2
2,771,321	-				-1.1
2,771,321	-				-0.8
2,771,321	-				+0.5
2,771,321	-				-1.0
2,771,377	+				+0.3
2,771,377	+				-0.1
2,771,377	+				+0.3
2,771,377	+				+0.5
2,771,377	+				+0.1
2,771,377	+				-0.4
2,771,377	+				-1.0
2,771,377	+				-1.7
2,771,377	+				-1.0
2,771,377	+				-0.6
2,771,377	+				+0.4
2,771,377	+				+0.3
2,771,377	+				+1.1
2,771,377	+				+0.1
2,771,377	+				-1.9
2,771,377	+				-0.3
2,771,377	+				-0.0
2,771,377	+				-1.2
2,771,377	+				-0.3
2,771,377	+				+0.1
2,771,377	+				-0.9
2,771,377	+				-0.9
2,771,377	+				-0.8
2,771,378	-				-1.6
2,771,378	-				+0.1
2,771,378	-				-1.0
2,771,378	-				+0.4
2,771,378	-				+0.2
2,771,378	-				-1.0
2,771,378	-				-0.6
2,771,378	-				+0.6
2,771,378	-				-0.5
2,771,378	-				-0.5
2,771,378	-				-0.5
2,771,378	-				-0.1
2,771,378	-				-0.2
2,771,378	-				+0.3
2,771,378	-				-0.2
2,771,378	-				-0.1
2,771,378	-				-0.6
2,771,378	-				-1.0
2,771,378	-				+0.4
2,771,378	-				-0.2
2,771,378	-				-0.6
2,771,378	-				-0.3
2,771,378	-				-1.8
2,771,379	+				-1.9
2,771,379	+				-0.8
2,771,379	+				-1.8
2,771,379	+				-1.5
2,771,379	+				-0.4
2,771,379	+				-0.8
2,771,379	+				-0.5
2,771,379	+				-0.2
2,771,379	+				-0.5
2,771,379	+				+0.4
2,771,380	-				-0.9
2,771,380	-				+0.1
2,771,380	-				+0.3
2,771,461	+				+0.2
2,771,461	+				-2.5
2,771,461	+				-1.3
2,771,461	+				-0.9
2,771,461	+				-1.4
2,771,461	+				-1.5
2,771,461	+				-0.9
2,771,461	+				-0.5
2,771,461	+				-0.7
2,771,462	-				-0.1
2,771,462	-				+2.3
2,771,462	-				-0.0
2,771,462	-				-1.2
2,771,462	-				-2.3
2,771,462	-				-0.4
2,771,562	+				-1.0
2,771,562	+				+0.8
2,771,562	+				+0.6
2,771,563	-				+0.6
2,771,563	-				-0.9
2,771,563	-				+0.6
2,771,563	-				-0.2
2,771,563	-				-0.2
2,771,563	-				-2.5
2,771,563	-				+1.4
2,771,563	-				-1.5
2,771,563	-				+1.0
2,771,748	+		MPMX19_02655	0.34	+0.2
2,771,748	+		MPMX19_02655	0.34	+0.1
2,771,748	+		MPMX19_02655	0.34	-0.5
2,771,748	+		MPMX19_02655	0.34	-2.0
2,771,748	+		MPMX19_02655	0.34	-0.4
2,771,748	+		MPMX19_02655	0.34	+0.7
2,771,748	+		MPMX19_02655	0.34	+0.3
2,771,748	+		MPMX19_02655	0.34	+0.6
2,771,748	+		MPMX19_02655	0.34	-0.5
2,771,748	+		MPMX19_02655	0.34	-0.8
2,771,748	+		MPMX19_02655	0.34	+0.3
2,771,748	+		MPMX19_02655	0.34	-0.3
2,771,748	+		MPMX19_02655	0.34	-0.6
2,771,748	+		MPMX19_02655	0.34	-0.1
2,771,748	+		MPMX19_02655	0.34	+0.2
2,771,748	+		MPMX19_02655	0.34	-0.2
2,771,748	+		MPMX19_02655	0.34	-1.5
2,771,748	+		MPMX19_02655	0.34	-1.1
2,771,748	+		MPMX19_02655	0.34	-0.5
2,771,748	+		MPMX19_02655	0.34	-1.1
2,771,748	+		MPMX19_02655	0.34	-2.1
2,771,748	+		MPMX19_02655	0.34	+0.1
2,771,748	+		MPMX19_02655	0.34	+0.5
2,771,748	+		MPMX19_02655	0.34	+0.4
2,771,748	+		MPMX19_02655	0.34	+0.6
2,771,748	+		MPMX19_02655	0.34	-0.0
2,771,749	-		MPMX19_02655	0.34	-0.0
2,771,749	-		MPMX19_02655	0.34	+0.7
2,771,749	-		MPMX19_02655	0.34	+0.4
2,771,749	-		MPMX19_02655	0.34	-1.5
2,771,749	-		MPMX19_02655	0.34	+1.0
2,771,749	-		MPMX19_02655	0.34	-0.4
2,771,749	-		MPMX19_02655	0.34	-0.4
2,771,749	-		MPMX19_02655	0.34	-1.3
2,771,749	-		MPMX19_02655	0.34	-0.0
2,771,749	-		MPMX19_02655	0.34	-0.7
2,771,749	-		MPMX19_02655	0.34	+0.4
2,771,749	-		MPMX19_02655	0.34	+0.8
2,771,749	-		MPMX19_02655	0.34	-0.6
2,771,749	-		MPMX19_02655	0.34	-0.0
2,771,749	-		MPMX19_02655	0.34	+0.1
2,771,749	-		MPMX19_02655	0.34	-0.2
2,771,749	-		MPMX19_02655	0.34	-0.6
2,771,749	-		MPMX19_02655	0.34	-1.4
2,771,749	-		MPMX19_02655	0.34	-0.5
2,771,749	-		MPMX19_02655	0.34	-0.6
2,771,749	-		MPMX19_02655	0.34	+0.1
2,771,749	-		MPMX19_02655	0.34	-0.0
2,771,749	-		MPMX19_02655	0.34	+0.3
2,771,749	-		MPMX19_02655	0.34	-0.3
2,771,749	-		MPMX19_02655	0.34	+1.1
2,772,060	+		MPMX19_02655	0.82	+1.0
2,772,060	+		MPMX19_02655	0.82	-0.9
2,772,060	+		MPMX19_02655	0.82	-1.4
2,772,060	+		MPMX19_02655	0.82	-1.6
2,772,060	+		MPMX19_02655	0.82	+0.7
2,772,060	+		MPMX19_02655	0.82	-0.3
2,772,060	+		MPMX19_02655	0.82	-0.2
2,772,060	+		MPMX19_02655	0.82	-1.3
2,772,060	+		MPMX19_02655	0.82	+0.1
2,772,060	+		MPMX19_02655	0.82	+1.1
2,772,060	+		MPMX19_02655	0.82	-1.9
2,772,060	+		MPMX19_02655	0.82	-0.3
2,772,060	+		MPMX19_02655	0.82	+0.7
2,772,060	+		MPMX19_02655	0.82	+1.0
2,772,060	+		MPMX19_02655	0.82	+0.0
2,772,060	+		MPMX19_02655	0.82	+1.7
2,772,060	+		MPMX19_02655	0.82	-1.2
2,772,060	+		MPMX19_02655	0.82	-0.5
2,772,060	+		MPMX19_02655	0.82	-0.0
2,772,060	+		MPMX19_02655	0.82	+0.1
2,772,060	+		MPMX19_02655	0.82	-0.7
2,772,061	-		MPMX19_02655	0.82	+0.4
2,772,061	-		MPMX19_02655	0.82	-0.5
2,772,061	-		MPMX19_02655	0.82	-1.1
2,772,061	-		MPMX19_02655	0.82	-1.8
2,772,061	-		MPMX19_02655	0.82	-0.8
2,772,061	-		MPMX19_02655	0.82	+0.1
2,772,061	-		MPMX19_02655	0.82	+0.6
2,772,061	-		MPMX19_02655	0.82	-1.1
2,772,061	-		MPMX19_02655	0.82	+0.5
2,772,061	-		MPMX19_02655	0.82	-1.9
2,772,061	-		MPMX19_02655	0.82	-1.1
2,772,061	-		MPMX19_02655	0.82	+0.2
2,772,061	-		MPMX19_02655	0.82	-0.0
2,772,061	-		MPMX19_02655	0.82	-0.7
2,772,061	-		MPMX19_02655	0.82	-0.5
2,772,061	-		MPMX19_02655	0.82	-0.3
2,772,061	-		MPMX19_02655	0.82	-0.3
2,772,061	-		MPMX19_02655	0.82	-0.1
2,772,061	-		MPMX19_02655	0.82	+0.2
2,772,061	-		MPMX19_02655	0.82	+1.0
2,772,061	-		MPMX19_02655	0.82	-0.9
2,772,061	-		MPMX19_02655	0.82	+0.4
2,772,061	-		MPMX19_02655	0.82	-2.3
2,772,061	-		MPMX19_02655	0.82	+0.3
2,772,093	+		MPMX19_02655	0.87	+1.1
2,772,093	+		MPMX19_02655	0.87	+0.6
2,772,093	+		MPMX19_02655	0.87	+2.0
2,772,093	+		MPMX19_02655	0.87	-2.0
2,772,093	+		MPMX19_02655	0.87	-0.2
2,772,093	+		MPMX19_02655	0.87	-0.5
2,772,093	+		MPMX19_02655	0.87	+1.0
2,772,093	+		MPMX19_02655	0.87	-2.3
2,772,093	+		MPMX19_02655	0.87	+0.2
2,772,093	+		MPMX19_02655	0.87	-1.1
2,772,093	+		MPMX19_02655	0.87	-0.7
2,772,093	+		MPMX19_02655	0.87	-1.1
2,772,093	+		MPMX19_02655	0.87	-1.3
2,772,093	+		MPMX19_02655	0.87	-0.9
2,772,093	+		MPMX19_02655	0.87	-1.3
2,772,094	-		MPMX19_02655	0.87	-0.5
2,772,094	-		MPMX19_02655	0.87	-1.4
2,772,094	-		MPMX19_02655	0.87	-0.9
2,772,094	-		MPMX19_02655	0.87	-0.4
2,772,094	-		MPMX19_02655	0.87	+0.2
2,772,094	-		MPMX19_02655	0.87	-1.0
2,772,094	-		MPMX19_02655	0.87	-0.9
2,772,094	-		MPMX19_02655	0.87	-0.6
2,772,094	-		MPMX19_02655	0.87	+0.5
2,772,094	-		MPMX19_02655	0.87	+0.2
2,772,094	-		MPMX19_02655	0.87	-0.6
2,772,094	-		MPMX19_02655	0.87	-0.2
2,772,094	-		MPMX19_02655	0.87	-1.0
2,772,094	-		MPMX19_02655	0.87	-0.6
2,772,094	-		MPMX19_02655	0.87	-0.8
2,772,094	-		MPMX19_02655	0.87	-0.1
2,772,095	+		MPMX19_02655	0.87	+1.0
2,772,095	+		MPMX19_02655	0.87	-0.8
2,772,095	+		MPMX19_02655	0.87	-0.4
2,772,095	+		MPMX19_02655	0.87	+1.1
2,772,095	+		MPMX19_02655	0.87	+0.1
2,772,095	+		MPMX19_02655	0.87	+0.8
2,772,095	+		MPMX19_02655	0.87	-0.5
2,772,095	+		MPMX19_02655	0.87	-0.6
2,772,095	+		MPMX19_02655	0.87	+0.2
2,772,095	+		MPMX19_02655	0.87	-0.3
2,772,095	+		MPMX19_02655	0.87	-0.2
2,772,095	+		MPMX19_02655	0.87	-0.6
2,772,095	+		MPMX19_02655	0.87	+1.0
2,772,095	+		MPMX19_02655	0.87	+0.1
2,772,095	+		MPMX19_02655	0.87	-0.1
2,772,096	-		MPMX19_02655	0.88	-1.5
2,772,096	-		MPMX19_02655	0.88	+0.5
2,772,096	-		MPMX19_02655	0.88	-2.2
2,772,096	-		MPMX19_02655	0.88	+0.9
2,772,096	-		MPMX19_02655	0.88	-0.6
2,772,096	-		MPMX19_02655	0.88	+0.3
2,772,096	-		MPMX19_02655	0.88	-0.0
2,772,096	-		MPMX19_02655	0.88	-0.1
2,772,096	-		MPMX19_02655	0.88	+0.2
2,772,096	-		MPMX19_02655	0.88	-1.0
2,772,096	-		MPMX19_02655	0.88	+0.7
2,772,096	-		MPMX19_02655	0.88	-1.5
2,772,096	-		MPMX19_02655	0.88	-1.5
2,772,096	-		MPMX19_02655	0.88	-0.3
2,772,096	-		MPMX19_02655	0.88	+0.2
2,772,096	-		MPMX19_02655	0.88	-0.1