Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02653

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,766,756	-				-0.5
2,766,840	+				-1.4
2,766,861	+				+0.8
2,766,862	-				-0.2
2,766,862	-				-1.3
2,766,862	-				-0.9
2,766,987	+		MPMX19_02652	0.21	-0.1
2,766,987	+		MPMX19_02652	0.21	-0.2
2,766,987	+		MPMX19_02652	0.21	-0.3
2,766,987	+		MPMX19_02652	0.21	-1.1
2,766,987	+		MPMX19_02652	0.21	-0.3
2,766,987	+		MPMX19_02652	0.21	+0.1
2,766,987	+		MPMX19_02652	0.21	+0.1
2,766,987	+		MPMX19_02652	0.21	-0.0
2,766,987	+		MPMX19_02652	0.21	-0.8
2,766,987	+		MPMX19_02652	0.21	+1.2
2,766,987	+		MPMX19_02652	0.21	+0.2
2,766,987	+		MPMX19_02652	0.21	+0.1
2,766,987	+		MPMX19_02652	0.21	-0.6
2,766,987	+		MPMX19_02652	0.21	+0.7
2,766,987	+		MPMX19_02652	0.21	-1.0
2,766,987	+		MPMX19_02652	0.21	-1.3
2,766,988	-		MPMX19_02652	0.21	+0.4
2,766,988	-		MPMX19_02652	0.21	-0.0
2,766,988	-		MPMX19_02652	0.21	-0.4
2,766,988	-		MPMX19_02652	0.21	+1.5
2,766,988	-		MPMX19_02652	0.21	-0.3
2,766,988	-		MPMX19_02652	0.21	-0.8
2,766,988	-		MPMX19_02652	0.21	-1.8
2,766,988	-		MPMX19_02652	0.21	-0.1
2,766,988	-		MPMX19_02652	0.21	-0.6
2,766,988	-		MPMX19_02652	0.21	+0.6
2,766,988	-		MPMX19_02652	0.21	-1.1
2,766,988	-		MPMX19_02652	0.21	-0.9
2,766,988	-		MPMX19_02652	0.21	+0.3
2,766,988	-		MPMX19_02652	0.21	-0.4
2,766,988	-		MPMX19_02652	0.21	-0.5
2,766,988	-		MPMX19_02652	0.21	-1.3
2,766,988	-		MPMX19_02652	0.21	-0.4
2,766,988	-		MPMX19_02652	0.21	-0.1
2,767,386	+		MPMX19_02652	0.67	+2.0
2,767,386	+		MPMX19_02652	0.67	-0.2
2,767,386	+		MPMX19_02652	0.67	-0.2
2,767,386	+		MPMX19_02652	0.67	-0.3
2,767,386	+		MPMX19_02652	0.67	-0.2
2,767,386	+		MPMX19_02652	0.67	-0.8
2,767,386	+		MPMX19_02652	0.67	+0.0
2,767,386	+		MPMX19_02652	0.67	-0.0
2,767,386	+		MPMX19_02652	0.67	-0.3
2,767,386	+		MPMX19_02652	0.67	-0.8
2,767,386	+		MPMX19_02652	0.67	-0.7
2,767,386	+		MPMX19_02652	0.67	+1.0
2,767,387	-		MPMX19_02652	0.67	-0.8
2,767,387	-		MPMX19_02652	0.67	+1.8
2,767,387	-		MPMX19_02652	0.67	+0.1
2,767,387	-		MPMX19_02652	0.67	+0.6
2,767,387	-		MPMX19_02652	0.67	-1.1
2,767,387	-		MPMX19_02652	0.67	+0.5
2,767,387	-		MPMX19_02652	0.67	-0.1
2,767,387	-		MPMX19_02652	0.67	-0.1
2,767,387	-		MPMX19_02652	0.67	-0.9
2,767,387	-		MPMX19_02652	0.67	-0.0
2,767,398	+		MPMX19_02652	0.68	+0.7
2,767,398	+		MPMX19_02652	0.68	-0.6
2,767,398	+		MPMX19_02652	0.68	+0.2
2,767,398	+		MPMX19_02652	0.68	-0.0
2,767,398	+		MPMX19_02652	0.68	-0.5
2,767,398	+		MPMX19_02652	0.68	-0.3
2,767,398	+		MPMX19_02652	0.68	-0.0
2,767,398	+		MPMX19_02652	0.68	-0.6
2,767,398	+		MPMX19_02652	0.68	-0.5
2,767,398	+		MPMX19_02652	0.68	-0.6
2,767,398	+		MPMX19_02652	0.68	-1.6
2,767,398	+		MPMX19_02652	0.68	+1.3
2,767,398	+		MPMX19_02652	0.68	+0.2
2,767,398	+		MPMX19_02652	0.68	-2.0
2,767,399	-		MPMX19_02652	0.68	-0.3
2,767,399	-		MPMX19_02652	0.68	+0.3
2,767,399	-		MPMX19_02652	0.68	-1.2
2,767,399	-		MPMX19_02652	0.68	-1.3
2,767,399	-		MPMX19_02652	0.68	-0.6
2,767,399	-		MPMX19_02652	0.68	+0.2
2,767,399	-		MPMX19_02652	0.68	-0.2
2,767,399	-		MPMX19_02652	0.68	-1.4
2,767,399	-		MPMX19_02652	0.68	-0.5
2,767,563	+		MPMX19_02652	0.87	-1.7
2,767,563	+		MPMX19_02652	0.87	-1.9
2,767,563	+		MPMX19_02652	0.87	-0.3
2,767,563	+		MPMX19_02652	0.87	+0.4
2,767,563	+		MPMX19_02652	0.87	+0.6
2,767,564	-		MPMX19_02652	0.87	-0.3
2,767,564	-		MPMX19_02652	0.87	-0.0
2,767,564	-		MPMX19_02652	0.87	-0.3
2,767,564	-		MPMX19_02652	0.87	-0.3
2,767,564	-		MPMX19_02652	0.87	+0.6
2,767,564	-		MPMX19_02652	0.87	+0.7
2,767,564	-		MPMX19_02652	0.87	+0.1
2,767,564	-		MPMX19_02652	0.87	+0.2
2,767,564	-		MPMX19_02652	0.87	-0.2
2,767,564	-		MPMX19_02652	0.87	-0.5
2,767,564	-		MPMX19_02652	0.87	+1.4
2,767,564	-		MPMX19_02652	0.87	+0.7
2,767,782	+				-0.5
2,767,783	-				-0.3
2,767,783	-				-1.5
2,767,851	+				+0.2
2,767,851	+				+0.4
2,767,851	+				-1.0
2,767,851	+				-0.8
2,767,851	+				-0.1
2,767,851	+				+1.6
2,767,851	+				-0.9
2,767,851	+				+2.5
2,767,851	+				-1.8
2,767,851	+				-1.5
2,767,851	+				+0.1
2,767,851	+				+0.7
2,767,851	+				-1.0
2,767,851	+				-0.8
2,767,851	+				+0.7
2,767,851	+				-1.1
2,767,851	+				+0.4
2,767,851	+				-1.5
2,767,851	+				+0.1
2,767,851	+				+0.1
2,767,851	+				+1.1
2,767,851	+				-1.0
2,767,851	+				-1.1
2,767,851	+				-1.9
2,767,851	+				+2.0
2,767,851	+				-1.0
2,767,851	+				+0.3
2,767,851	+				-0.9
2,767,851	+				+0.2
2,767,851	+				-0.6
2,767,851	+				+0.7
2,767,851	+				-0.6
2,767,851	+				-0.5
2,767,851	+				+0.4
2,767,851	+				-0.2
2,767,851	+				-1.0
2,767,851	+				-1.4
2,767,851	+				+1.1
2,767,851	+				+0.1
2,767,852	-				-2.4
2,767,852	-				-0.6
2,767,852	-				+1.0
2,767,852	-				-0.4
2,767,852	-				-0.4
2,767,852	-				-0.5
2,767,852	-				+1.0
2,767,852	-				-0.3
2,767,852	-				-0.7
2,767,852	-				+1.3
2,767,852	-				-1.2
2,767,852	-				+0.5
2,767,852	-				-0.9
2,767,852	-				-0.1
2,767,852	-				-0.5
2,767,852	-				-2.1
2,767,852	-				-1.0
2,767,852	-				-0.2
2,767,852	-				-0.5
2,767,852	-				-1.2
2,767,852	-				-0.2
2,767,852	-				-1.2
2,767,852	-				-1.2
2,767,852	-				+0.1
2,767,852	-				-0.2
2,767,852	-				-0.1
2,767,852	-				-0.3
2,767,852	-				-1.6
2,767,852	-				-1.9
2,767,852	-				-1.5
2,767,852	-				+0.4
2,767,852	-				+0.2
2,767,852	-				+0.1
2,767,852	-				-0.5
2,767,852	-				-0.8
2,767,852	-				-1.2
2,767,852	-				+2.0
2,767,852	-				-2.1
2,768,556	+		MPMX19_02653	0.58	+0.6
2,768,784	+		MPMX19_02653	0.75	-0.1
2,768,784	+		MPMX19_02653	0.75	-0.8
2,768,784	+		MPMX19_02653	0.75	-0.5
2,768,784	+		MPMX19_02653	0.75	+0.3
2,768,784	+		MPMX19_02653	0.75	-0.5
2,768,785	-		MPMX19_02653	0.75	-0.9
2,768,785	-		MPMX19_02653	0.75	-0.6
2,768,785	-		MPMX19_02653	0.75	-1.6
2,768,785	-		MPMX19_02653	0.75	-1.1
2,768,799	+		MPMX19_02653	0.76	+0.1
2,768,799	+		MPMX19_02653	0.76	+0.5
2,768,799	+		MPMX19_02653	0.76	-1.4
2,768,799	+		MPMX19_02653	0.76	-0.4
2,768,800	-		MPMX19_02653	0.76	+0.6
2,768,800	-		MPMX19_02653	0.76	-2.1
2,768,800	-		MPMX19_02653	0.76	-0.8
2,768,800	-		MPMX19_02653	0.76	-0.1
2,768,800	-		MPMX19_02653	0.76	+0.1
2,768,868	+		MPMX19_02653	0.81	-0.9
2,768,868	+		MPMX19_02653	0.81	-0.9
2,768,869	-		MPMX19_02653	0.81	+0.5
2,769,326	+				+0.9
2,769,326	+				-1.0
2,769,326	+				-0.2
2,769,326	+				+0.9
2,769,326	+				-0.2
2,769,326	+				-0.7
2,769,326	+				-0.0
2,769,326	+				+0.2
2,769,326	+				-1.1
2,769,326	+				-0.4
2,769,326	+				-0.1
2,769,326	+				-0.8
2,769,326	+				-0.3
2,769,326	+				-0.6
2,769,326	+				-1.3
2,769,326	+				-0.0
2,769,327	-				+0.2
2,769,327	-				+0.7
2,769,327	-				+0.7
2,769,327	-				-0.8
2,769,327	-				+0.2
2,769,327	-				-0.4
2,769,327	-				+0.1
2,769,327	-				+0.7
2,769,327	-				+0.2
2,769,327	-				-0.8
2,769,327	-				-1.3
2,769,327	-				+0.0
2,769,327	-				+0.5
2,769,327	-				+0.5
2,769,327	-				-1.1
2,769,327	-				-0.2
2,769,327	-				-0.8
2,769,327	-				-0.1
2,769,327	-				-0.3
2,769,328	+				-0.8
2,769,328	+				-0.6
2,769,328	+				+0.7
2,769,328	+				-1.3
2,769,328	+				-0.2
2,769,328	+				-0.9
2,769,328	+				+0.3
2,769,328	+				+0.6
2,769,328	+				+0.4
2,769,328	+				-1.3
2,769,328	+				-0.4
2,769,328	+				+0.2
2,769,328	+				-0.6
2,769,328	+				-1.2
2,769,328	+				-0.3
2,769,328	+				-0.6
2,769,328	+				-1.6
2,769,328	+				-0.1
2,769,328	+				+0.3
2,769,328	+				-0.1
2,769,328	+				-0.9
2,769,328	+				+0.2
2,769,328	+				-2.2
2,769,328	+				+1.7
2,769,328	+				-0.8
2,769,328	+				+0.7
2,769,328	+				+0.1
2,769,328	+				-0.8
2,769,328	+				+0.0
2,769,328	+				-0.2
2,769,328	+				-1.3
2,769,328	+				-1.0
2,769,328	+				-1.1
2,769,328	+				-1.2
2,769,328	+				-0.1
2,769,328	+				+1.1
2,769,328	+				-1.0
2,769,328	+				-0.7
2,769,328	+				-0.4
2,769,329	-				-0.5
2,769,329	-				-0.6
2,769,329	-				-0.6
2,769,329	-				-0.0
2,769,329	-				+1.0
2,769,329	-				+0.6
2,769,329	-				-1.5
2,769,329	-				-1.1
2,769,329	-				-0.5
2,769,329	-				+0.1
2,769,329	-				+0.6
2,769,329	-				-1.8
2,769,329	-				-1.3
2,769,329	-				-1.2
2,769,329	-				-1.2
2,769,329	-				-0.9
2,769,329	-				-0.8
2,769,329	-				+0.7
2,769,329	-				+0.2
2,769,329	-				-0.3
2,769,329	-				-1.4
2,769,329	-				+0.1
2,769,329	-				-0.3
2,769,329	-				-0.0
2,769,329	-				-1.9
2,769,329	-				-0.8
2,769,345	+				+0.2
2,769,467	+				-1.4
2,769,467	+				+0.1
2,769,467	+				-0.0
2,769,467	+				-1.5
2,769,468	-				-0.4
2,769,468	-				-0.3
2,769,468	-				-0.3
2,769,468	-				-1.8
2,769,468	-				-1.2
2,769,475	+				-1.0
2,769,476	-				-1.6
2,769,476	-				-0.9
2,769,476	-				+0.3
2,769,481	+				+0.8
2,769,481	+				-0.3
2,769,481	+				-0.8
2,769,481	+				-0.5
2,769,481	+				-0.1
2,769,481	+				+0.2
2,769,481	+				+0.1
2,769,481	+				-1.0
2,769,481	+				-1.5
2,769,481	+				-0.6
2,769,481	+				-0.8
2,769,481	+				-1.5
2,769,481	+				-1.3
2,769,481	+				-1.0
2,769,481	+				-1.2
2,769,481	+				+0.4
2,769,481	+				-0.7
2,769,482	-				-1.2
2,769,482	-				-1.5
2,769,482	-				-0.6
2,769,482	-				-0.6
2,769,482	-				-0.3
2,769,482	-				+0.2
2,769,482	-				+0.2
2,769,482	-				-1.0
2,769,482	-				+1.0
2,769,482	-				-1.2
2,769,482	-				-0.9
2,769,482	-				+0.8
2,769,482	-				-2.5
2,769,482	-				+0.1
2,769,482	-				+0.1
2,769,498	-				-1.4
2,769,498	-				+0.9
2,769,511	+				+0.7
2,769,511	+				-0.6
2,769,511	+				-1.6
2,769,512	-				-1.8
2,769,512	-				-0.0
2,769,525	+				+0.8
2,769,525	+				-1.9
2,769,525	+				-1.6
2,769,525	+				-0.4
2,769,526	-				-1.9
2,769,526	-				+1.2
2,769,526	-				-0.3
2,769,526	-				-0.2
2,769,526	-				+0.2
2,769,526	-				-0.5
2,769,526	-				+0.1
2,769,526	-				-0.4
2,769,554	+				+0.9
2,769,554	+				+0.3
2,769,554	+				+0.9
2,769,554	+				-2.3
2,769,554	+				-0.3
2,769,554	+				+0.2
2,769,554	+				-1.3
2,769,554	+				-0.2
2,769,554	+				-0.5
2,769,554	+				-0.6
2,769,554	+				-3.1
2,769,554	+				+0.8
2,769,554	+				-0.8
2,769,555	-				-1.0
2,769,555	-				-1.6
2,769,555	-				-1.3
2,769,555	-				-0.2
2,769,555	-				-0.0
2,769,555	-				+0.4
2,769,555	-				-0.5
2,769,555	-				-2.8
2,769,579	+				+0.1
2,769,579	+				-0.7
2,769,579	+				-0.0
2,769,579	+				-0.8
2,769,579	+				-0.9
2,769,580	-				+1.0
2,769,580	-				-2.2
2,769,580	-				-0.4
2,769,601	+				-0.3
2,769,601	+				-0.2
2,769,601	+				-0.9
2,769,601	+				-1.3
2,769,602	-				-0.7
2,769,602	-				-0.2
2,769,602	-				-0.4
2,769,602	-				-0.1
2,769,602	-				-2.0
2,769,623	+				-0.9
2,769,623	+				-1.5
2,769,623	+				+0.5
2,769,623	+				-0.9
2,769,623	+				+0.9
2,769,624	-				-0.5
2,769,624	-				+0.4
2,769,624	-				-0.5
2,769,624	-				-1.0
2,769,624	-				-0.4
2,769,624	-				+0.1
2,769,624	-				-1.6
2,769,624	-				-0.2
2,769,624	-				+0.8
2,769,765	+				+1.7
2,769,765	+				+0.4
2,769,774	+				+1.5
2,769,774	+				+0.9
2,769,774	+				-0.4
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