Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01883

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,962,429	+		MPMX19_01882	0.26	-0.9
1,962,429	+		MPMX19_01882	0.26	-0.2
1,962,429	+		MPMX19_01882	0.26	+0.2
1,962,429	+		MPMX19_01882	0.26	-0.2
1,962,429	+		MPMX19_01882	0.26	-0.7
1,962,430	+		MPMX19_01882	0.26	-0.2
1,962,430	-		MPMX19_01882	0.26	-1.8
1,962,430	-		MPMX19_01882	0.26	-2.4
1,962,430	-		MPMX19_01882	0.26	-1.9
1,962,430	-		MPMX19_01882	0.26	-0.4
1,962,430	-		MPMX19_01882	0.26	+0.2
1,962,430	-		MPMX19_01882	0.26	+0.4
1,962,430	-		MPMX19_01882	0.26	-0.3
1,962,430	-		MPMX19_01882	0.26	-0.5
1,962,430	-		MPMX19_01882	0.26	-1.2
1,962,441	+		MPMX19_01882	0.28	-0.8
1,962,441	+		MPMX19_01882	0.28	-0.1
1,962,441	+		MPMX19_01882	0.28	+1.3
1,962,441	+		MPMX19_01882	0.28	+0.5
1,962,441	+		MPMX19_01882	0.28	-0.4
1,962,442	-		MPMX19_01882	0.28	-0.8
1,962,442	-		MPMX19_01882	0.28	-0.8
1,962,442	-		MPMX19_01882	0.28	-0.6
1,962,522	+		MPMX19_01882	0.38	-1.4
1,962,522	+		MPMX19_01882	0.38	-1.1
1,962,522	+		MPMX19_01882	0.38	-1.8
1,962,522	+		MPMX19_01882	0.38	-0.9
1,962,522	+		MPMX19_01882	0.38	-1.8
1,962,522	+		MPMX19_01882	0.38	+1.0
1,962,522	+		MPMX19_01882	0.38	+0.5
1,962,522	+		MPMX19_01882	0.38	-0.8
1,962,522	+		MPMX19_01882	0.38	-0.9
1,962,523	-		MPMX19_01882	0.38	-2.6
1,962,523	-		MPMX19_01882	0.38	+0.2
1,962,523	-		MPMX19_01882	0.38	-0.5
1,962,523	-		MPMX19_01882	0.38	-1.9
1,962,523	-		MPMX19_01882	0.38	+0.5
1,962,544	-		MPMX19_01882	0.40	+0.7
1,962,544	-		MPMX19_01882	0.40	+1.5
1,962,783	+		MPMX19_01882	0.69	-0.7
1,962,783	+		MPMX19_01882	0.69	-1.6
1,962,783	+		MPMX19_01882	0.69	+0.2
1,962,783	+		MPMX19_01882	0.69	-0.1
1,962,783	+		MPMX19_01882	0.69	-0.2
1,962,784	-		MPMX19_01882	0.69	+0.7
1,962,784	-		MPMX19_01882	0.69	+1.0
1,963,059	+				-1.9
1,963,059	+				-2.4
1,963,059	+				-1.6
1,963,059	+				-0.2
1,963,059	+				-0.2
1,963,059	+				-0.9
1,963,059	+				-0.1
1,963,059	+				-1.4
1,963,059	+				-1.0
1,963,059	+				-0.9
1,963,059	+				-1.6
1,963,059	+				+0.1
1,963,059	+				-1.3
1,963,059	+				-0.6
1,963,060	-				+0.4
1,963,060	-				-2.1
1,963,060	-				+0.9
1,963,060	-				+0.1
1,963,060	-				-0.1
1,963,060	-				-0.8
1,963,060	-				-0.8
1,963,060	-				-0.1
1,963,060	-				-0.5
1,963,060	-				+0.6
1,963,060	-				+0.3
1,963,060	-				-1.1
1,963,060	-				-0.7
1,963,060	-				+0.7
1,963,092	-				-1.9
1,963,092	-				-2.9
1,963,092	-				-1.6
1,963,111	+				-0.9
1,963,111	+				-0.9
1,963,111	+				-1.6
1,963,111	+				+0.7
1,963,111	+				+1.2
1,963,112	-				-0.7
1,963,112	-				-1.1
1,963,112	-				+0.6
1,963,112	-				-2.2
1,963,112	-				+0.1
1,963,112	-				-0.9
1,963,112	-				-1.0
1,963,112	-				-0.3
1,963,112	-				-1.1
1,963,239	+				-0.8
1,963,239	+				-1.4
1,963,240	-				+0.1
1,963,240	-				-0.0
1,963,255	+				+0.3
1,963,255	+				-0.8
1,963,255	+				-0.9
1,963,255	+				+0.8
1,963,255	+				-1.6
1,963,256	-				-0.1
1,963,256	-				-1.5
1,963,256	-				-1.9
1,963,273	+				-1.0
1,963,273	+				-0.3
1,963,273	+				-0.5
1,963,273	+				-0.8
1,963,273	+				+0.2
1,963,273	+				+1.2
1,963,273	+				+0.2
1,963,273	+				-0.3
1,963,273	+				+0.2
1,963,273	+				-0.8
1,963,273	+				-0.6
1,963,273	+				+0.4
1,963,273	+				-2.1
1,963,273	+				-0.3
1,963,274	-				-1.6
1,963,274	-				-0.1
1,963,274	-				-0.8
1,963,274	-				-0.3
1,963,274	-				-0.7
1,963,274	-				-0.9
1,963,274	-				-0.6
1,963,274	-				-1.6
1,963,274	-				-1.1
1,963,274	-				-1.1
1,963,274	-				-0.7
1,963,274	-				-2.2
1,963,274	-				-2.3
1,963,274	-				-0.9
1,963,274	-				-1.9
1,963,274	-				-0.3
1,963,274	-				+1.1
1,963,274	-				-0.6
1,963,274	-				-1.8
1,963,274	-				-1.8
1,963,274	-				+0.1
1,963,274	-				-0.9
1,963,507	+		MPMX19_01883	0.11	-2.2
1,963,855	+		MPMX19_01883	0.27	+0.0
1,963,856	-		MPMX19_01883	0.27	-2.2
1,964,078	-		MPMX19_01883	0.37	-3.1
1,964,194	+		MPMX19_01883	0.42	-0.5
1,964,194	+		MPMX19_01883	0.42	-1.3
1,964,195	-		MPMX19_01883	0.42	-0.3
1,964,195	-		MPMX19_01883	0.42	-1.6
1,964,195	-		MPMX19_01883	0.42	+0.4
1,964,195	-		MPMX19_01883	0.42	-0.7
1,964,276	-		MPMX19_01883	0.46	-0.6
1,964,339	-		MPMX19_01883	0.49	-1.9
1,964,339	-		MPMX19_01883	0.49	-2.1
1,964,339	-		MPMX19_01883	0.49	+0.1
1,964,395	+		MPMX19_01883	0.51	-1.3
1,964,395	+		MPMX19_01883	0.51	+0.1
1,964,395	+		MPMX19_01883	0.51	-3.5
1,964,395	+		MPMX19_01883	0.51	-1.7
1,964,396	-		MPMX19_01883	0.51	-0.6
1,964,396	-		MPMX19_01883	0.51	-1.6
1,964,396	-		MPMX19_01883	0.51	-1.2
1,964,396	-		MPMX19_01883	0.51	+1.5
1,964,396	-		MPMX19_01883	0.51	-0.1
1,964,396	-		MPMX19_01883	0.51	-2.3
1,964,396	-		MPMX19_01883	0.51	-2.1
1,964,396	-		MPMX19_01883	0.51	-1.2
1,964,396	-		MPMX19_01883	0.51	-1.6
1,964,540	+		MPMX19_01883	0.58	-1.9
1,964,540	+		MPMX19_01883	0.58	-2.2
1,964,540	+		MPMX19_01883	0.58	+0.7
1,964,541	-		MPMX19_01883	0.58	-1.3
1,964,541	-		MPMX19_01883	0.58	-2.2
1,964,541	-		MPMX19_01883	0.58	-2.2
1,964,541	-		MPMX19_01883	0.58	-0.5
1,964,541	-		MPMX19_01883	0.58	-3.2
1,964,541	-		MPMX19_01883	0.58	-2.2
1,964,842	+		MPMX19_01883	0.71	-2.9
1,964,842	+		MPMX19_01883	0.71	-0.5
1,964,842	+		MPMX19_01883	0.71	-3.1
1,964,843	-		MPMX19_01883	0.71	-2.7
1,964,843	-		MPMX19_01883	0.71	-1.6
1,964,843	-		MPMX19_01883	0.71	-0.5
1,964,843	-		MPMX19_01883	0.71	+0.1
1,964,878	+		MPMX19_01883	0.73	-1.1
1,964,942	-		MPMX19_01883	0.76	-0.5
1,965,167	-		MPMX19_01883	0.86	-0.5
1,965,167	-		MPMX19_01883	0.86	-0.6
1,965,167	-		MPMX19_01883	0.86	-1.8
1,965,167	-		MPMX19_01883	0.86	+0.1
1,965,167	-		MPMX19_01883	0.86	-2.1
1,965,310	+				-1.1
1,965,310	+				-1.8
1,965,310	+				-0.6
1,965,311	-				+0.5
1,965,311	-				-2.2
1,965,311	-				-1.9
1,965,311	-				-1.3
1,965,311	-				-1.9
1,965,311	-				+0.5
1,965,311	-				-0.1
1,965,464	+				-1.8
1,965,465	-				-3.0
1,965,465	-				+0.1
1,965,465	-				-0.8
1,965,667	-		MPMX19_01884	0.28	-1.9
1,965,726	+		MPMX19_01884	0.36	-0.6
1,965,727	-		MPMX19_01884	0.36	-1.6
1,965,727	-		MPMX19_01884	0.36	-2.5
1,965,727	-		MPMX19_01884	0.36	-3.0
1,965,727	-		MPMX19_01884	0.36	-0.8
1,965,999	+		MPMX19_01884	0.76	-2.1
1,966,000	-		MPMX19_01884	0.76	-0.5
1,966,000	-		MPMX19_01884	0.76	-0.9
1,966,008	+		MPMX19_01884	0.77	-0.3
1,966,216	+				+0.5
1,966,217	-				-0.1
1,966,279	+				-0.6
1,966,279	+				-0.8
1,966,279	+				+0.4
1,966,279	+				-0.2
1,966,279	+				-0.3
1,966,279	+				+1.2
1,966,279	+				+0.1
1,966,279	+				+0.1
1,966,279	+				-1.5
1,966,279	+				-1.1
1,966,280	-				-0.5
1,966,280	-				-0.2
1,966,280	-				+1.2
1,966,280	-				-1.4
1,966,280	-				-2.1
1,966,280	-				+0.5
1,966,280	-				-0.5
1,966,280	-				+0.1
1,966,280	-				-0.3
1,966,280	-				-1.0
1,966,280	-				+0.8
1,966,280	-				-1.0
1,966,280	-				-0.2
1,966,280	-				-2.4
1,966,345	+				+0.2
1,966,345	+				-0.3
1,966,345	+				-0.9
1,966,345	+				+1.1
1,966,345	+				+0.9
1,966,345	+				-1.4
1,966,345	+				-1.1
1,966,345	+				+1.2
1,966,345	+				-0.7
1,966,345	+				-0.5
1,966,345	+				-1.3
1,966,345	+				+0.3
1,966,345	+				+0.1
1,966,345	+				-0.5
1,966,345	+				-2.4
1,966,345	+				-1.5
1,966,345	+				-1.4
1,966,345	+				-0.4
1,966,345	+				+1.1
1,966,346	-				-1.8
1,966,346	-				-2.6
1,966,346	-				+0.3
1,966,346	-				-0.9
1,966,346	-				-0.6
1,966,346	-				-1.2
1,966,346	-				-0.2
1,966,346	-				-0.3
1,966,346	-				-0.2
1,966,346	-				-0.5
1,966,346	-				-1.1
1,966,346	-				-0.9
1,966,346	-				-1.7
1,966,346	-				-0.9
1,966,346	-				-0.7
1,966,346	-				-0.8
1,966,346	-				-3.2
1,966,346	-				+0.8
1,966,396	+				-0.2
1,966,396	+				-0.1
1,966,396	+				-0.4
1,966,397	-				-0.8
1,966,397	-				+0.1
1,966,442	+		MPMX19_01885	0.13	-0.6
1,966,442	+		MPMX19_01885	0.13	-1.5
1,966,442	+		MPMX19_01885	0.13	-0.5
1,966,442	+		MPMX19_01885	0.13	-0.1
1,966,443	-		MPMX19_01885	0.13	+0.0
1,966,443	-		MPMX19_01885	0.13	-0.4
1,966,443	-		MPMX19_01885	0.13	-1.5