Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01380

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,441,947	+		MPMX19_01379	0.44	-1.7
1,441,947	+		MPMX19_01379	0.44	-1.0
1,441,947	+		MPMX19_01379	0.44	+0.6
1,441,947	+		MPMX19_01379	0.44	-0.0
1,441,947	+		MPMX19_01379	0.44	+1.1
1,441,947	+		MPMX19_01379	0.44	-1.0
1,441,947	+		MPMX19_01379	0.44	+0.7
1,441,947	+		MPMX19_01379	0.44	-0.3
1,441,948	-		MPMX19_01379	0.44	-1.9
1,441,948	-		MPMX19_01379	0.44	-0.9
1,441,948	-		MPMX19_01379	0.44	-0.9
1,441,948	-		MPMX19_01379	0.44	+0.2
1,441,948	-		MPMX19_01379	0.44	-0.1
1,441,948	-		MPMX19_01379	0.44	-0.9
1,442,382	+		MPMX19_01379	0.70	+0.3
1,442,383	-		MPMX19_01379	0.70	-0.5
1,442,383	-		MPMX19_01379	0.70	-0.1
1,442,423	+		MPMX19_01379	0.72	-0.1
1,442,424	-		MPMX19_01379	0.72	-0.3
1,442,424	-		MPMX19_01379	0.72	-0.7
1,442,424	-		MPMX19_01379	0.72	-1.7
1,442,499	+		MPMX19_01379	0.77	+2.5
1,442,499	+		MPMX19_01379	0.77	+0.3
1,442,500	-		MPMX19_01379	0.77	-0.7
1,442,500	-		MPMX19_01379	0.77	-0.7
1,442,500	-		MPMX19_01379	0.77	-0.7
1,442,500	-		MPMX19_01379	0.77	-0.5
1,442,500	-		MPMX19_01379	0.77	+0.6
1,442,505	+		MPMX19_01379	0.77	+0.6
1,442,505	+		MPMX19_01379	0.77	+0.2
1,442,506	-		MPMX19_01379	0.77	-1.1
1,442,506	-		MPMX19_01379	0.77	+0.5
1,442,506	-		MPMX19_01379	0.77	+0.2
1,442,532	+		MPMX19_01379	0.79	-0.5
1,442,532	+		MPMX19_01379	0.79	-1.9
1,442,532	+		MPMX19_01379	0.79	+1.5
1,442,533	-		MPMX19_01379	0.79	-0.5
1,442,841	+				-1.9
1,442,841	+				-0.3
1,442,841	+				-1.5
1,442,841	+				+0.5
1,442,841	+				+1.6
1,442,841	+				-0.7
1,442,841	+				-0.2
1,442,842	-				-0.3
1,442,842	-				-1.8
1,442,842	-				+0.2
1,442,842	-				-1.9
1,442,842	-				-1.7
1,442,842	-				-0.3
1,442,842	-				+0.1
1,442,842	-				-1.0
1,442,842	-				+1.6
1,442,842	-				-0.7
1,442,842	-				-0.9
1,442,842	-				-0.1
1,442,842	-				-0.9
1,442,842	-				+0.0
1,442,842	-				+0.2
1,442,842	-				-0.8
1,442,842	-				-0.5
1,442,842	-				-0.4
1,442,842	-				-0.1
1,443,037	+				-0.9
1,443,052	+				+1.3
1,443,052	+				+0.5
1,443,052	+				-0.3
1,443,052	+				-0.6
1,443,052	+				+0.1
1,443,053	-				+0.5
1,443,053	-				+0.1
1,443,053	-				-1.1
1,443,053	-				-0.5
1,443,053	-				-1.1
1,443,129	-		MPMX19_01380	0.13	+1.9
1,443,256	+		MPMX19_01380	0.19	-1.6
1,443,256	+		MPMX19_01380	0.19	-1.5
1,443,256	+		MPMX19_01380	0.19	-0.3
1,443,256	+		MPMX19_01380	0.19	-0.6
1,443,256	+		MPMX19_01380	0.19	-0.2
1,443,256	+		MPMX19_01380	0.19	-0.2
1,443,256	+		MPMX19_01380	0.19	+0.2
1,443,256	+		MPMX19_01380	0.19	-0.4
1,443,256	+		MPMX19_01380	0.19	-0.8
1,443,256	+		MPMX19_01380	0.19	-2.2
1,443,256	+		MPMX19_01380	0.19	+0.6
1,443,257	-		MPMX19_01380	0.19	-0.6
1,443,257	-		MPMX19_01380	0.19	-0.7
1,443,257	-		MPMX19_01380	0.19	+1.2
1,443,257	-		MPMX19_01380	0.19	-0.2
1,443,257	-		MPMX19_01380	0.19	+0.5
1,443,257	-		MPMX19_01380	0.19	-0.3
1,443,257	-		MPMX19_01380	0.19	-0.3
1,443,310	+		MPMX19_01380	0.22	-0.0
1,443,310	+		MPMX19_01380	0.22	+0.2
1,443,310	+		MPMX19_01380	0.22	-0.0
1,443,311	-		MPMX19_01380	0.22	-0.9
1,443,311	-		MPMX19_01380	0.22	-1.4
1,443,352	+		MPMX19_01380	0.24	-0.1
1,443,352	+		MPMX19_01380	0.24	-1.1
1,443,353	-		MPMX19_01380	0.24	-0.0
1,443,353	-		MPMX19_01380	0.24	-1.7
1,443,353	-		MPMX19_01380	0.24	+0.3
1,443,353	-		MPMX19_01380	0.24	+0.1
1,443,397	+		MPMX19_01380	0.27	+0.7
1,443,397	+		MPMX19_01380	0.27	+0.6
1,443,397	+		MPMX19_01380	0.27	-3.4
1,443,397	+		MPMX19_01380	0.27	-0.7
1,443,397	+		MPMX19_01380	0.27	-0.0
1,443,397	+		MPMX19_01380	0.27	-0.6
1,443,397	+		MPMX19_01380	0.27	+0.0
1,443,397	+		MPMX19_01380	0.27	-1.4
1,443,397	+		MPMX19_01380	0.27	+0.0
1,443,397	+		MPMX19_01380	0.27	+0.2
1,443,397	+		MPMX19_01380	0.27	+1.9
1,443,397	+		MPMX19_01380	0.27	+1.1
1,443,397	+		MPMX19_01380	0.27	+0.2
1,443,397	+		MPMX19_01380	0.27	-0.3
1,443,397	+		MPMX19_01380	0.27	-1.6
1,443,397	+		MPMX19_01380	0.27	-0.3
1,443,397	+		MPMX19_01380	0.27	-0.2
1,443,398	-		MPMX19_01380	0.27	-1.3
1,443,398	-		MPMX19_01380	0.27	+0.8
1,443,398	-		MPMX19_01380	0.27	-0.5
1,443,398	-		MPMX19_01380	0.27	-0.9
1,443,398	-		MPMX19_01380	0.27	-0.4
1,443,398	-		MPMX19_01380	0.27	+0.3
1,443,398	-		MPMX19_01380	0.27	+0.0
1,443,398	-		MPMX19_01380	0.27	+0.1
1,443,398	-		MPMX19_01380	0.27	-2.1
1,443,398	-		MPMX19_01380	0.27	+0.5
1,443,398	-		MPMX19_01380	0.27	-0.4
1,443,398	-		MPMX19_01380	0.27	+0.5
1,443,398	-		MPMX19_01380	0.27	-0.9
1,443,398	-		MPMX19_01380	0.27	-1.8
1,443,532	+		MPMX19_01380	0.34	+2.6
1,443,532	+		MPMX19_01380	0.34	-0.5
1,443,532	+		MPMX19_01380	0.34	+0.6
1,443,532	+		MPMX19_01380	0.34	+0.9
1,443,532	+		MPMX19_01380	0.34	-0.8
1,443,532	+		MPMX19_01380	0.34	-0.5
1,443,532	+		MPMX19_01380	0.34	+0.1
1,443,533	-		MPMX19_01380	0.34	-0.3
1,443,533	-		MPMX19_01380	0.34	+0.6
1,443,533	-		MPMX19_01380	0.34	+0.5
1,443,533	-		MPMX19_01380	0.34	-0.2
1,443,533	-		MPMX19_01380	0.34	+0.5
1,443,533	-		MPMX19_01380	0.34	+1.1
1,443,533	-		MPMX19_01380	0.34	+0.6
1,443,533	-		MPMX19_01380	0.34	-0.5
1,443,533	-		MPMX19_01380	0.34	-1.0
1,444,021	+		MPMX19_01380	0.60	+1.5
1,444,021	+		MPMX19_01380	0.60	-0.3
1,444,021	+		MPMX19_01380	0.60	-0.9
1,444,022	-		MPMX19_01380	0.60	-0.0
1,444,022	-		MPMX19_01380	0.60	+0.3
1,444,022	-		MPMX19_01380	0.60	-1.0
1,444,022	-		MPMX19_01380	0.60	-0.3
1,444,022	-		MPMX19_01380	0.60	-0.2
1,444,022	-		MPMX19_01380	0.60	-2.0
1,444,036	+		MPMX19_01380	0.61	-1.1
1,444,036	+		MPMX19_01380	0.61	+0.5
1,444,036	+		MPMX19_01380	0.61	-0.0
1,444,037	-		MPMX19_01380	0.61	-1.5
1,444,037	-		MPMX19_01380	0.61	-0.2
1,444,037	-		MPMX19_01380	0.61	-0.9
1,444,037	-		MPMX19_01380	0.61	+0.4
1,444,037	-		MPMX19_01380	0.61	-0.8
1,444,037	-		MPMX19_01380	0.61	-0.5
1,444,037	-		MPMX19_01380	0.61	-0.6
1,444,037	-		MPMX19_01380	0.61	-0.3
1,444,049	-		MPMX19_01380	0.61	-0.9
1,444,049	-		MPMX19_01380	0.61	-1.4
1,444,085	+		MPMX19_01380	0.63	+1.2
1,444,085	+		MPMX19_01380	0.63	-0.3
1,444,085	+		MPMX19_01380	0.63	-0.7
1,444,085	+		MPMX19_01380	0.63	+1.5
1,444,419	+		MPMX19_01380	0.81	+3.9
1,444,419	+		MPMX19_01380	0.81	+0.2
1,444,419	+		MPMX19_01380	0.81	-0.3
1,444,419	+		MPMX19_01380	0.81	+0.3
1,444,420	-		MPMX19_01380	0.81	-0.5
1,444,420	-		MPMX19_01380	0.81	+0.2
1,444,420	-		MPMX19_01380	0.81	-1.1
1,444,450	+		MPMX19_01380	0.82	-0.9
1,444,450	+		MPMX19_01380	0.82	+0.5
1,444,450	+		MPMX19_01380	0.82	+0.2
1,444,450	+		MPMX19_01380	0.82	+0.5
1,444,450	+		MPMX19_01380	0.82	-0.8
1,444,450	+		MPMX19_01380	0.82	-0.8
1,444,450	+		MPMX19_01380	0.82	+0.8
1,444,450	+		MPMX19_01380	0.82	-0.3
1,444,450	+		MPMX19_01380	0.82	-0.6
1,444,451	-		MPMX19_01380	0.82	-0.5
1,444,451	-		MPMX19_01380	0.82	+0.2
1,444,451	-		MPMX19_01380	0.82	-1.0
1,444,451	-		MPMX19_01380	0.82	+0.1
1,444,451	-		MPMX19_01380	0.82	+0.1
1,444,451	-		MPMX19_01380	0.82	+0.8
1,444,534	+		MPMX19_01380	0.87	+0.5
1,444,534	+		MPMX19_01380	0.87	-0.9
1,444,534	+		MPMX19_01380	0.87	+0.8
1,444,534	+		MPMX19_01380	0.87	-0.3
1,444,534	+		MPMX19_01380	0.87	-0.2
1,444,534	+		MPMX19_01380	0.87	-1.3
1,444,534	+		MPMX19_01380	0.87	+0.4
1,444,534	+		MPMX19_01380	0.87	-0.8
1,444,534	+		MPMX19_01380	0.87	-0.8
1,444,534	+		MPMX19_01380	0.87	+1.5
1,444,534	+		MPMX19_01380	0.87	-1.7
1,444,534	+		MPMX19_01380	0.87	-1.0
1,444,534	+		MPMX19_01380	0.87	-0.1
1,444,535	-		MPMX19_01380	0.87	-0.6
1,444,535	-		MPMX19_01380	0.87	+0.1
1,444,535	-		MPMX19_01380	0.87	+0.1
1,444,535	-		MPMX19_01380	0.87	-0.2
1,444,535	-		MPMX19_01380	0.87	-1.5
1,444,535	-		MPMX19_01380	0.87	+0.6
1,444,535	-		MPMX19_01380	0.87	-0.8
1,444,535	-		MPMX19_01380	0.87	-0.5
1,444,535	-		MPMX19_01380	0.87	+1.1
1,444,535	-		MPMX19_01380	0.87	-0.6
1,444,535	-		MPMX19_01380	0.87	+0.1
1,444,535	-		MPMX19_01380	0.87	+0.1
1,444,535	-		MPMX19_01380	0.87	-0.2
1,444,535	-		MPMX19_01380	0.87	-1.2
1,444,535	-		MPMX19_01380	0.87	+0.2
1,444,535	-		MPMX19_01380	0.87	-0.6
1,444,714	+				-0.8
1,444,714	+				-0.7
1,444,714	+				-0.1
1,444,714	+				-0.7
1,444,714	+				+1.3
1,444,714	+				-0.4
1,444,714	+				+0.3
1,444,715	-				-1.5
1,444,715	-				+0.1
1,444,715	-				-0.1
1,444,715	-				-2.2
1,444,715	-				-1.5
1,444,715	-				-1.3
1,444,715	-				-0.2
1,444,715	-				-0.1
1,444,715	-				+1.7
1,444,715	-				-0.9
1,444,715	-				-0.5
1,444,715	-				-0.4
1,444,715	-				-0.5
1,444,765	+				-2.1
1,444,765	+				+1.4
1,444,765	+				+0.7
1,444,765	+				+0.0
1,444,765	+				+0.1
1,444,765	+				-2.5
1,444,765	+				-0.9
1,444,765	+				-0.2
1,444,765	+				+1.8
1,444,765	+				-1.3
1,444,765	+				-0.2
1,444,765	+				-0.1
1,444,765	+				+0.2
1,444,765	+				-0.2
1,444,765	+				-0.1
1,444,765	+				-1.2
1,444,765	+				-0.2
1,444,765	+				-1.3
1,444,766	-				-0.2
1,444,766	-				-0.1
1,444,766	-				-1.0
1,444,766	-				-1.1
1,444,766	-				-1.3
1,444,766	-				-0.9
1,444,766	-				-0.3
1,444,766	-				-0.8
1,444,766	-				+0.9
1,444,766	-				+0.4
1,444,766	-				-1.2
1,444,766	-				-0.5
1,444,766	-				-0.9
1,444,766	-				-0.0
1,444,766	-				+1.1
1,444,766	-				-1.3
1,444,766	-				-2.0
1,444,766	-				-0.8
1,444,766	-				+0.8
1,444,766	-				+0.7
1,444,766	-				-1.0
1,444,782	+				-0.3
1,444,782	+				+0.9
1,444,782	+				-1.7
1,444,782	+				-2.2
1,444,782	+				+1.3
1,444,782	+				-1.1
1,444,803	-				+0.6
1,444,865	+				-0.4
1,444,865	+				-0.9
1,444,865	+				-2.5
1,444,865	+				-0.6
1,444,865	+				+0.4
1,444,865	+				-0.5
1,444,865	+				-0.4
1,444,865	+				-0.5
1,444,866	-				-0.9
1,444,866	-				-1.4
1,444,866	-				-0.1
1,444,890	+				+0.1
1,444,891	-				-0.2
1,444,897	+				+0.5
1,444,897	+				+0.7
1,444,897	+				-1.5
1,444,897	+				-0.7
1,444,898	-				-2.2
1,444,898	-				+0.2
1,444,898	-				-0.5
1,444,898	-				-0.1
1,444,898	-				-1.9
1,444,898	-				-0.3
1,444,903	+				-2.1
1,444,903	+				+0.4
1,444,903	+				-1.4
1,444,903	+				+1.1
1,444,903	+				+0.2
1,444,904	-				-1.3
1,444,904	-				+0.6
1,444,904	-				+0.1
1,444,908	+				-0.4
1,444,909	-				-1.1
1,444,993	+		MPMX19_01381	0.18	-1.7
1,444,993	+		MPMX19_01381	0.18	-1.6
1,444,993	+		MPMX19_01381	0.18	-2.0
1,444,993	+		MPMX19_01381	0.18	-1.8
1,444,993	+		MPMX19_01381	0.18	-0.1
1,444,993	+		MPMX19_01381	0.18	-0.9
1,444,994	-		MPMX19_01381	0.18	+0.8
1,444,994	-		MPMX19_01381	0.18	-0.3
1,444,994	-		MPMX19_01381	0.18	-1.2
1,444,994	-		MPMX19_01381	0.18	-1.9
1,445,026	+		MPMX19_01381	0.24	+0.1
1,445,026	+		MPMX19_01381	0.24	-0.4
1,445,026	+		MPMX19_01381	0.24	+0.1
1,445,026	+		MPMX19_01381	0.24	-0.1
1,445,026	+		MPMX19_01381	0.24	-0.5
1,445,026	+		MPMX19_01381	0.24	+1.1
1,445,026	+		MPMX19_01381	0.24	-1.0
1,445,026	+		MPMX19_01381	0.24	+0.4
1,445,026	+		MPMX19_01381	0.24	-1.1
1,445,026	+		MPMX19_01381	0.24	+0.1
1,445,026	+		MPMX19_01381	0.24	-0.7
1,445,026	+		MPMX19_01381	0.24	-0.5
1,445,026	+		MPMX19_01381	0.24	-0.3
1,445,026	+		MPMX19_01381	0.24	-0.9
1,445,026	+		MPMX19_01381	0.24	+0.7
1,445,026	+		MPMX19_01381	0.24	-0.4
1,445,026	+		MPMX19_01381	0.24	-0.7
1,445,027	-		MPMX19_01381	0.25	-0.4
1,445,027	-		MPMX19_01381	0.25	+0.1
1,445,027	-		MPMX19_01381	0.25	-1.3
1,445,027	-		MPMX19_01381	0.25	-1.7
1,445,027	-		MPMX19_01381	0.25	-0.2
1,445,027	-		MPMX19_01381	0.25	-1.5
1,445,027	-		MPMX19_01381	0.25	-0.9
1,445,027	-		MPMX19_01381	0.25	-0.4
1,445,027	-		MPMX19_01381	0.25	-1.3
1,445,027	-		MPMX19_01381	0.25	-0.5
1,445,027	-		MPMX19_01381	0.25	-1.5
1,445,027	-		MPMX19_01381	0.25	-1.6
1,445,027	-		MPMX19_01381	0.25	+0.1
1,445,027	-		MPMX19_01381	0.25	+0.3
1,445,027	-		MPMX19_01381	0.25	+0.8
1,445,027	-		MPMX19_01381	0.25	+1.8
1,445,027	-		MPMX19_01381	0.25	-0.5
1,445,027	-		MPMX19_01381	0.25	-0.7
1,445,027	-		MPMX19_01381	0.25	-0.2
1,445,027	-		MPMX19_01381	0.25	+0.5
1,445,027	-		MPMX19_01381	0.25	-0.1
1,445,027	-		MPMX19_01381	0.25	-0.3
1,445,176	+		MPMX19_01381	0.54	-0.6
1,445,176	+		MPMX19_01381	0.54	-0.8
1,445,176	+		MPMX19_01381	0.54	+0.5
1,445,176	+		MPMX19_01381	0.54	+0.7
1,445,177	-		MPMX19_01381	0.54	-0.7
1,445,177	-		MPMX19_01381	0.54	+0.5
1,445,177	-		MPMX19_01381	0.54	-0.6
1,445,177	-		MPMX19_01381	0.54	+0.2
1,445,177	-		MPMX19_01381	0.54	-0.7
1,445,422	+				+0.4
1,445,439	+				-2.1
1,445,458	-				-0.2
1,445,537	+				-1.3
1,445,537	+				+0.1
1,445,537	+				+0.1
1,445,538	-				+0.1
1,445,538	-				+2.0
1,445,538	-				-0.0
1,445,566	+				-1.9
1,445,566	+				-0.0
1,445,566	+				-1.2
1,445,567	-				-0.6
1,445,567	-				-1.5
1,445,567	-				-1.8
1,445,569	+				-0.5
1,445,569	+				+0.5
1,445,569	+				-0.4
1,445,569	+				-2.1
1,445,569	+				-0.7
1,445,569	+				-0.7
1,445,569	+				-2.2
1,445,569	+				-0.3
1,445,569	+				-0.5
1,445,569	+				-0.4
1,445,569	+				-1.0
1,445,569	+				-0.6
1,445,569	+				+0.6
1,445,569	+				+0.0
1,445,569	+				+0.7
1,445,569	+				-0.5
1,445,569	+				+0.5
1,445,569	+				-0.7
1,445,569	+				+0.2
1,445,569	+				-1.3
1,445,569	+				+0.1
1,445,569	+				+0.1
1,445,569	+				-0.4
1,445,569	+				-0.7
1,445,569	+				+0.8
1,445,569	+				+0.5
1,445,569	+				-1.0
1,445,569	+				+0.5
1,445,569	+				-1.3
1,445,569	+				-1.9
1,445,569	+				-1.2
1,445,569	+				-0.3
1,445,569	+				-0.8
1,445,569	+				+1.6
1,445,569	+				+0.1
1,445,569	+				-1.7
1,445,570	-				-0.3
1,445,570	-				-1.1
1,445,570	-				-0.7
1,445,570	-				-0.5
1,445,570	-				+0.6
1,445,570	-				-0.4
1,445,570	-				-0.7
1,445,570	-				+0.4
1,445,570	-				+0.9
1,445,570	-				-0.1
1,445,570	-				-2.5
1,445,570	-				-1.5
1,445,570	-				-1.2
1,445,570	-				-0.7
1,445,570	-				+0.1
1,445,570	-				-0.5
1,445,570	-				-0.2
1,445,570	-				-0.8
1,445,570	-				-0.1
1,445,570	-				-0.1
1,445,570	-				-0.7
1,445,570	-				+0.1
1,445,570	-				-0.1
1,445,570	-				+0.3
1,445,570	-				-0.3
1,445,570	-				-0.1
1,445,570	-				-0.5
1,445,570	-				-0.1
1,445,570	-				+0.7
1,445,570	-				-0.7
1,445,570	-				-1.6
1,445,570	-				-1.7
1,445,570	-				-0.3
1,445,570	-				+0.7
1,445,570	-				-1.5
1,445,570	-				-1.1
1,445,570	-				-1.0
1,445,570	-				-1.2
1,445,570	-				-1.1
1,445,570	-				-1.7
1,445,570	-				-0.5
1,445,570	-				-0.4
1,445,570	-				-0.0
1,445,570	-				-0.1
1,445,750	+				-1.0
1,445,750	+				+0.2
1,445,750	+				+0.5
1,445,750	+				+0.5
1,445,750	+				+0.3
1,445,750	+				-0.9
1,445,750	+				+0.3
1,445,750	+				-2.6
1,445,750	+				-1.0
1,445,750	+				+0.6
1,445,750	+				+0.1
1,445,750	+				+0.5
1,445,750	+				+0.5
1,445,751	-				-0.1
1,445,751	-				-0.6
1,445,751	-				+0.8
1,445,751	-				-1.0
1,445,751	-				+0.5
1,445,751	-				+0.7
1,445,751	-				+0.4
1,445,751	-				-0.7