Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01371

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,427,375	+		MPMX19_01369	0.74	-0.9
1,427,375	+		MPMX19_01369	0.74	+1.2
1,427,375	+		MPMX19_01369	0.74	-0.0
1,427,375	+		MPMX19_01369	0.74	-0.1
1,427,375	+		MPMX19_01369	0.74	-0.9
1,427,375	+		MPMX19_01369	0.74	-0.4
1,427,375	+		MPMX19_01369	0.74	+0.5
1,427,375	+		MPMX19_01369	0.74	+0.8
1,427,376	-		MPMX19_01369	0.74	-2.0
1,427,376	-		MPMX19_01369	0.74	+0.3
1,427,376	-		MPMX19_01369	0.74	-0.6
1,427,376	-		MPMX19_01369	0.74	-0.6
1,427,376	-		MPMX19_01369	0.74	-1.0
1,427,376	-		MPMX19_01369	0.74	+0.5
1,427,376	-		MPMX19_01369	0.74	-0.6
1,427,376	-		MPMX19_01369	0.74	+0.3
1,427,376	-		MPMX19_01369	0.74	-1.3
1,427,376	-		MPMX19_01369	0.74	-0.3
1,427,390	+		MPMX19_01369	0.77	-0.9
1,427,390	+		MPMX19_01369	0.77	-0.3
1,427,390	+		MPMX19_01369	0.77	-1.2
1,427,390	+		MPMX19_01369	0.77	-0.1
1,427,391	-		MPMX19_01369	0.78	-0.8
1,427,391	-		MPMX19_01369	0.78	-1.1
1,427,391	-		MPMX19_01369	0.78	+0.5
1,427,391	-		MPMX19_01369	0.78	+1.5
1,427,391	-		MPMX19_01369	0.78	+0.5
1,427,391	-		MPMX19_01369	0.78	-0.2
1,427,391	-		MPMX19_01369	0.78	+1.5
1,427,391	-		MPMX19_01369	0.78	-1.2
1,427,391	-		MPMX19_01369	0.78	-1.6
1,427,391	-		MPMX19_01369	0.78	-1.0
1,427,391	-		MPMX19_01369	0.78	-0.1
1,427,399	+		MPMX19_01369	0.79	-1.7
1,427,399	+		MPMX19_01369	0.79	-1.9
1,427,399	+		MPMX19_01369	0.79	+0.5
1,427,399	+		MPMX19_01369	0.79	-0.6
1,427,400	-		MPMX19_01369	0.80	-1.3
1,427,400	-		MPMX19_01369	0.80	-1.3
1,427,400	-		MPMX19_01369	0.80	-1.0
1,427,400	-		MPMX19_01369	0.80	+0.1
1,427,400	-		MPMX19_01369	0.80	-1.3
1,427,400	-		MPMX19_01369	0.80	-0.9
1,427,411	+		MPMX19_01369	0.82	+0.2
1,427,411	+		MPMX19_01369	0.82	-0.9
1,427,411	+		MPMX19_01369	0.82	-1.3
1,427,411	+		MPMX19_01369	0.82	-1.3
1,427,411	+		MPMX19_01369	0.82	+0.5
1,427,412	-		MPMX19_01369	0.82	-1.3
1,427,412	-		MPMX19_01369	0.82	-1.3
1,427,412	-		MPMX19_01369	0.82	-0.7
1,427,412	-		MPMX19_01369	0.82	+0.0
1,427,412	-		MPMX19_01369	0.82	+0.1
1,427,412	-		MPMX19_01369	0.82	-0.3
1,427,412	-		MPMX19_01369	0.82	-0.8
1,427,412	-		MPMX19_01369	0.82	-0.5
1,427,412	-		MPMX19_01369	0.82	-0.6
1,427,575	+				-0.5
1,427,575	+				+0.7
1,427,575	+				-2.1
1,427,575	+				-0.7
1,427,575	+				-0.5
1,427,575	+				+1.1
1,427,575	+				-0.6
1,427,575	+				-0.4
1,427,575	+				-1.2
1,427,575	+				-0.9
1,427,575	+				+0.1
1,427,575	+				-1.1
1,427,575	+				-0.4
1,427,575	+				-0.3
1,427,575	+				+0.7
1,427,575	+				-0.6
1,427,575	+				-0.8
1,427,575	+				+0.1
1,427,576	-				-0.3
1,427,576	-				+0.1
1,427,576	-				+0.1
1,427,576	-				+0.7
1,427,576	-				-1.5
1,427,576	-				+0.9
1,427,576	-				+1.1
1,427,576	-				-0.4
1,427,576	-				+0.3
1,427,576	-				-1.9
1,427,576	-				+0.4
1,427,576	-				+1.1
1,427,576	-				-0.5
1,427,576	-				-0.5
1,427,576	-				+0.5
1,427,576	-				-0.9
1,427,576	-				-1.3
1,427,576	-				-0.5
1,427,576	-				-0.6
1,427,576	-				+0.3
1,427,691	+				+0.6
1,427,692	-				-0.1
1,427,692	-				-0.9
1,427,692	-				+0.0
1,427,692	-				-1.0
1,427,806	+				-0.6
1,427,806	+				-0.2
1,427,828	+				-0.6
1,427,828	+				-0.8
1,427,828	+				+1.5
1,427,828	+				-0.6
1,427,829	-				-0.9
1,427,829	-				+0.6
1,427,829	-				+0.3
1,427,829	-				+0.4
1,427,838	+				+0.5
1,427,838	+				-0.8
1,427,839	-				+0.5
1,427,839	-				-1.3
1,427,994	+				-0.5
1,427,994	+				-0.2
1,427,995	-				+0.1
1,427,995	-				-1.5
1,427,995	-				-0.9
1,428,020	+				+0.4
1,428,020	+				-0.1
1,428,020	+				-0.2
1,428,020	+				-0.0
1,428,021	-				-1.3
1,428,021	-				-1.3
1,428,124	-				-1.0
1,428,124	-				-1.0
1,428,124	-				+0.7
1,428,142	+				-1.1
1,428,142	+				-1.3
1,428,142	+				+2.5
1,428,142	+				-1.8
1,428,142	+				-0.4
1,428,142	+				-0.8
1,428,143	-				-1.9
1,428,143	-				-0.1
1,428,143	-				+0.3
1,428,143	-				-0.6
1,428,143	-				+0.5
1,428,143	-				-0.2
1,428,309	-				-0.1
1,428,309	-				-0.9
1,428,414	+		MPMX19_01371	0.10	+0.0
1,428,415	-		MPMX19_01371	0.10	-1.1
1,428,415	-		MPMX19_01371	0.10	-0.3
1,428,415	-		MPMX19_01371	0.10	+0.1
1,428,452	+		MPMX19_01371	0.15	-0.5
1,428,452	+		MPMX19_01371	0.15	+0.5
1,428,452	+		MPMX19_01371	0.15	-0.1
1,428,452	+		MPMX19_01371	0.15	-0.5
1,428,452	+		MPMX19_01371	0.15	-1.3
1,428,453	-		MPMX19_01371	0.15	+0.8
1,428,453	-		MPMX19_01371	0.15	-0.0
1,428,453	-		MPMX19_01371	0.15	-0.6
1,428,453	-		MPMX19_01371	0.15	-0.7
1,429,031	+		MPMX19_01371	0.83	-1.8
1,429,031	+		MPMX19_01371	0.83	-1.7
1,429,031	+		MPMX19_01371	0.83	+0.1
1,429,031	+		MPMX19_01371	0.83	-0.4
1,429,031	+		MPMX19_01371	0.83	-0.9
1,429,031	+		MPMX19_01371	0.83	+0.0
1,429,031	+		MPMX19_01371	0.83	-2.4
1,429,031	+		MPMX19_01371	0.83	+0.2
1,429,031	+		MPMX19_01371	0.83	-0.9
1,429,031	+		MPMX19_01371	0.83	-0.1
1,429,031	+		MPMX19_01371	0.83	-1.7
1,429,031	+		MPMX19_01371	0.83	-0.5
1,429,031	+		MPMX19_01371	0.83	-0.3
1,429,031	+		MPMX19_01371	0.83	-0.7
1,429,032	-		MPMX19_01371	0.83	-0.4
1,429,032	-		MPMX19_01371	0.83	-1.7
1,429,032	-		MPMX19_01371	0.83	-0.9
1,429,032	-		MPMX19_01371	0.83	-1.5
1,429,032	-		MPMX19_01371	0.83	-1.1
1,429,032	-		MPMX19_01371	0.83	-1.4
1,429,032	-		MPMX19_01371	0.83	-0.3
1,429,288	+				-1.0
1,429,288	+				-1.1
1,429,288	+				-1.0
1,429,304	+				-1.3
1,429,304	+				-1.3
1,429,304	+				-1.1
1,429,308	+				-0.3
1,429,308	+				-1.7
1,429,308	+				-1.3
1,429,308	+				-0.9
1,429,308	+				-1.1
1,429,308	+				-2.0
1,429,308	+				-0.9
1,429,308	+				-1.6
1,429,308	+				-0.9
1,429,308	+				+0.4
1,429,308	+				-0.1
1,429,309	-				+0.7
1,429,309	-				-1.2
1,429,309	-				-0.7
1,429,309	-				-0.3
1,429,309	-				-0.3
1,429,309	-				-0.1
1,429,309	-				-1.3
1,429,309	-				-0.3
1,429,309	-				-0.2
1,429,309	-				+0.5
1,429,309	-				-2.0
1,429,309	-				-0.4
1,429,309	-				-0.9
1,429,347	+				+1.1
1,429,357	+				-0.7
1,429,357	+				-0.5
1,429,357	+				-1.2
1,429,357	+				+0.1
1,429,357	+				-0.5
1,429,357	+				+1.1
1,429,357	+				-1.3
1,429,358	-				-0.5
1,429,358	-				-1.4
1,429,358	-				-1.1
1,429,358	-				-0.9
1,429,358	-				-0.8
1,429,358	-				-2.0
1,429,358	-				-0.3
1,429,358	-				+0.0
1,429,358	-				-0.5
1,429,373	-				+0.9
1,429,373	-				-1.1
1,429,373	-				-1.2
1,429,373	-				-1.3
1,429,380	-				-1.1
1,429,380	-				-1.3
1,429,384	+				-0.6
1,429,385	-				+0.0
1,429,385	-				-0.3
1,429,393	+				+1.8
1,429,394	-				-0.5
1,429,394	-				-0.5
1,429,426	+				-0.9
1,429,426	+				+1.8
1,429,426	+				+0.0
1,429,427	-				-1.3
1,429,427	-				-0.2
1,429,444	+				-0.2
1,429,445	-				-0.9
1,429,445	-				-0.1
1,429,519	+				-1.1
1,429,524	-				-0.3
1,429,524	-				-1.7
1,429,555	+				-0.5
1,429,555	+				-2.3
1,429,555	+				-1.7
1,429,556	-				-0.4
1,429,556	-				-0.3
1,429,556	-				-1.1
1,429,556	-				-0.3
1,429,565	+				-0.2
1,429,565	+				-0.3
1,429,565	+				+1.1
1,429,565	+				+0.5
1,429,566	-				-0.9
1,429,566	-				-0.2
1,429,566	-				-1.1
1,429,566	-				-0.4
1,429,566	-				-1.9
1,429,597	+				+0.1
1,429,598	-				-1.2
1,429,605	+				+0.7
1,429,606	-				+1.2
1,429,700	+				-0.7
1,429,700	+				-1.9
1,429,700	+				+0.1
1,429,700	+				-0.2
1,429,701	-				-1.1
1,429,701	-				+0.1
1,429,940	-		MPMX19_01372	0.14	+0.6
1,429,940	-		MPMX19_01372	0.14	-0.6
1,429,940	-		MPMX19_01372	0.14	+1.0
1,429,940	-		MPMX19_01372	0.14	-0.0
1,429,940	-		MPMX19_01372	0.14	-0.6
1,429,940	-		MPMX19_01372	0.14	+0.3
1,429,957	+		MPMX19_01372	0.16	-0.9
1,429,957	+		MPMX19_01372	0.16	-0.6
1,429,957	+		MPMX19_01372	0.16	-2.3
1,429,957	+		MPMX19_01372	0.16	-1.1
1,429,957	+		MPMX19_01372	0.16	-0.5
1,429,957	+		MPMX19_01372	0.16	-2.5
1,429,957	+		MPMX19_01372	0.16	+0.0
1,429,957	+		MPMX19_01372	0.16	+0.1
1,429,957	+		MPMX19_01372	0.16	+0.7
1,429,958	-		MPMX19_01372	0.16	-0.5
1,429,958	-		MPMX19_01372	0.16	+1.1
1,429,958	-		MPMX19_01372	0.16	-1.5
1,429,958	-		MPMX19_01372	0.16	-0.0
1,429,958	-		MPMX19_01372	0.16	+1.0
1,429,958	-		MPMX19_01372	0.16	-0.4
1,429,958	-		MPMX19_01372	0.16	-1.5
1,429,958	-		MPMX19_01372	0.16	-0.5
1,429,958	-		MPMX19_01372	0.16	-0.6
1,429,958	-		MPMX19_01372	0.16	+0.1
1,429,958	-		MPMX19_01372	0.16	-2.9
1,430,000	+		MPMX19_01372	0.20	-0.2
1,430,000	+		MPMX19_01372	0.20	-0.0
1,430,001	-		MPMX19_01372	0.21	-0.0
1,430,001	-		MPMX19_01372	0.21	-2.5
1,430,008	+		MPMX19_01372	0.21	-0.3
1,430,008	+		MPMX19_01372	0.21	-0.9
1,430,008	+		MPMX19_01372	0.21	-0.3
1,430,008	+		MPMX19_01372	0.21	+0.5
1,430,009	-		MPMX19_01372	0.21	+0.1
1,430,009	-		MPMX19_01372	0.21	+0.5
1,430,009	-		MPMX19_01372	0.21	-1.0
1,430,009	-		MPMX19_01372	0.21	-1.7
1,430,009	-		MPMX19_01372	0.21	+0.5
1,430,009	-		MPMX19_01372	0.21	-1.1
1,430,032	+		MPMX19_01372	0.24	+1.5
1,430,032	+		MPMX19_01372	0.24	-0.4
1,430,032	+		MPMX19_01372	0.24	+0.5
1,430,032	+		MPMX19_01372	0.24	-0.7
1,430,032	+		MPMX19_01372	0.24	+0.2
1,430,033	-		MPMX19_01372	0.24	-0.9