Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7320 and GFF7321 overlap by 1 nucleotides GFF7321 and GFF7322 are separated by 98 nucleotides GFF7322 and GFF7323 overlap by 4 nucleotides
GFF7320 - tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3), at 14,776 to 16,122
GFF7320
GFF7321 - Sensor histidine kinase GlrK, at 16,122 to 17,549
GFF7321
GFF7322 - hypothetical protein, at 17,648 to 18,259
GFF7322
GFF7323 - Transcriptional response regulatory protein GlrR, at 18,256 to 19,644
GFF7323
Position (kb) 16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.268 kb on + strand, within GFF7320 at 15.268 kb on + strand, within GFF7320 at 15.268 kb on + strand, within GFF7320 at 15.269 kb on - strand, within GFF7320 at 15.269 kb on - strand, within GFF7320 at 15.269 kb on - strand, within GFF7320 at 15.383 kb on - strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.475 kb on + strand, within GFF7320 at 15.475 kb on + strand, within GFF7320 at 15.476 kb on - strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.610 kb on + strand, within GFF7320 at 15.610 kb on + strand, within GFF7320 at 15.610 kb on + strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 16.066 kb on + strand at 16.066 kb on + strand at 16.066 kb on + strand at 16.066 kb on + strand at 16.066 kb on + strand at 16.067 kb on - strand at 16.067 kb on - strand at 16.067 kb on - strand at 16.067 kb on - strand at 16.230 kb on + strand at 16.230 kb on + strand at 16.230 kb on + strand at 16.230 kb on + strand at 16.231 kb on - strand at 16.231 kb on - strand at 16.231 kb on - strand at 16.231 kb on - strand at 16.352 kb on - strand, within GFF7321 at 16.455 kb on + strand, within GFF7321 at 16.456 kb on - strand, within GFF7321 at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 18.074 kb on + strand, within GFF7322 at 18.074 kb on + strand, within GFF7322 at 18.075 kb on - strand, within GFF7322 at 18.264 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 15,244 + GFF7320 0.35 -0.5 15,244 + GFF7320 0.35 -0.4 15,244 + GFF7320 0.35 -0.7 15,244 + GFF7320 0.35 +0.3 15,244 + GFF7320 0.35 +0.2 15,244 + GFF7320 0.35 -0.2 15,244 + GFF7320 0.35 -0.3 15,245 - GFF7320 0.35 -0.1 15,245 - GFF7320 0.35 -0.5 15,245 - GFF7320 0.35 +0.1 15,245 - GFF7320 0.35 +1.0 15,245 - GFF7320 0.35 +0.2 15,245 - GFF7320 0.35 +0.6 15,245 - GFF7320 0.35 +0.6 15,245 - GFF7320 0.35 -0.7 15,253 + GFF7320 0.35 +0.1 15,253 + GFF7320 0.35 -0.5 15,253 + GFF7320 0.35 +0.6 15,253 + GFF7320 0.35 -0.5 15,253 + GFF7320 0.35 +1.1 15,253 + GFF7320 0.35 -0.5 15,253 + GFF7320 0.35 +0.2 15,253 + GFF7320 0.35 +1.1 15,254 - GFF7320 0.35 -0.4 15,254 - GFF7320 0.35 -0.0 15,254 - GFF7320 0.35 +0.4 15,254 - GFF7320 0.35 -0.0 15,254 - GFF7320 0.35 -1.6 15,254 - GFF7320 0.35 -0.9 15,268 + GFF7320 0.37 -0.3 15,268 + GFF7320 0.37 +1.4 15,268 + GFF7320 0.37 -0.2 15,269 - GFF7320 0.37 -1.0 15,269 - GFF7320 0.37 +0.2 15,269 - GFF7320 0.37 -0.3 15,383 - GFF7320 0.45 -1.0 15,439 + GFF7320 0.49 -0.5 15,439 + GFF7320 0.49 -0.4 15,439 + GFF7320 0.49 +0.6 15,439 + GFF7320 0.49 +0.1 15,439 + GFF7320 0.49 +0.3 15,439 + GFF7320 0.49 -1.2 15,439 + GFF7320 0.49 +1.4 15,439 + GFF7320 0.49 +0.6 15,439 + GFF7320 0.49 -0.6 15,440 - GFF7320 0.49 -0.4 15,440 - GFF7320 0.49 -0.4 15,440 - GFF7320 0.49 +0.5 15,440 - GFF7320 0.49 +0.2 15,440 - GFF7320 0.49 -0.6 15,475 + GFF7320 0.52 +0.4 15,475 + GFF7320 0.52 +0.4 15,476 - GFF7320 0.52 +0.6 15,523 + GFF7320 0.55 +1.0 15,523 + GFF7320 0.55 -0.2 15,523 + GFF7320 0.55 -0.1 15,523 + GFF7320 0.55 -0.1 15,523 + GFF7320 0.55 -1.0 15,523 + GFF7320 0.55 -0.1 15,524 - GFF7320 0.56 -0.3 15,524 - GFF7320 0.56 +0.8 15,524 - GFF7320 0.56 -0.3 15,524 - GFF7320 0.56 -0.6 15,610 + GFF7320 0.62 +0.4 15,610 + GFF7320 0.62 +0.0 15,610 + GFF7320 0.62 -0.9 15,611 - GFF7320 0.62 -0.8 15,611 - GFF7320 0.62 +0.6 15,611 - GFF7320 0.62 +1.6 15,611 - GFF7320 0.62 +0.7 15,625 + GFF7320 0.63 +3.4 15,625 + GFF7320 0.63 -0.5 15,625 + GFF7320 0.63 +0.8 15,625 + GFF7320 0.63 +0.4 15,625 + GFF7320 0.63 -0.2 15,625 + GFF7320 0.63 +0.1 15,625 + GFF7320 0.63 -0.9 15,625 + GFF7320 0.63 -0.8 15,626 - GFF7320 0.63 -0.1 15,626 - GFF7320 0.63 -0.0 15,626 - GFF7320 0.63 -0.5 15,626 - GFF7320 0.63 -0.6 15,626 - GFF7320 0.63 -0.1 15,626 - GFF7320 0.63 +0.5 15,626 - GFF7320 0.63 -0.9 16,066 + +0.2 16,066 + -0.2 16,066 + +0.2 16,066 + +0.4 16,066 + +0.2 16,067 - +0.6 16,067 - -0.8 16,067 - +0.4 16,067 - +0.0 16,230 + -0.1 16,230 + +0.2 16,230 + -1.5 16,230 + -0.5 16,231 - -2.3 16,231 - -0.2 16,231 - -1.0 16,231 - -0.1 16,352 - GFF7321 0.16 +0.3 16,455 + GFF7321 0.23 -1.4 16,456 - GFF7321 0.23 -0.5 17,463 + +1.5 17,463 + +0.9 17,463 + +1.8 17,463 + -1.0 17,463 + -0.8 17,463 + -0.2 17,463 + -1.3 17,463 + -2.1 17,463 + +0.3 17,463 + -0.3 17,463 + -0.1 17,463 + +0.2 17,463 + -0.6 17,464 - +0.8 17,464 - -0.9 17,464 - -0.9 17,464 - -0.2 17,464 - -0.8 17,464 - +0.2 17,464 - -0.5 17,464 - -1.3 17,464 - -0.5 17,464 - +0.2 17,464 - +0.8 17,464 - +0.3 17,843 + GFF7322 0.32 -0.3 17,843 + GFF7322 0.32 +1.1 17,843 + GFF7322 0.32 -0.7 17,843 + GFF7322 0.32 -1.8 17,843 + GFF7322 0.32 -1.8 17,844 - GFF7322 0.32 -0.2 17,844 - GFF7322 0.32 -0.5 17,844 - GFF7322 0.32 +0.2 17,844 - GFF7322 0.32 +0.6 18,074 + GFF7322 0.70 -0.8 18,074 + GFF7322 0.70 -1.6 18,075 - GFF7322 0.70 -1.3 18,264 + -0.5
Or see this region's nucleotide sequence