Strain Fitness in Variovorax sp. SCN45 around GFF7203

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
20,333	+				+0.2
20,333	+				-0.2
20,333	+				+0.0
20,333	+				-0.1
20,334	-				-0.6
20,334	-				-0.6
20,484	-		GFF7202	0.25	-0.8
20,622	-		GFF7202	0.40	-0.1
20,622	-		GFF7202	0.40	+0.4
21,152	-				-1.2
21,387	+		GFF7203	0.16	-1.1
21,387	+		GFF7203	0.16	+0.2
21,387	+		GFF7203	0.16	+1.6
21,388	-		GFF7203	0.16	-0.7
21,676	+		GFF7203	0.36	+0.6
21,676	+		GFF7203	0.36	-0.3
21,787	+		GFF7203	0.43	+0.0
21,787	+		GFF7203	0.43	-0.8
21,788	-		GFF7203	0.43	+0.2
21,788	-		GFF7203	0.43	-0.8
22,043	-		GFF7203	0.61	+0.6
22,093	+		GFF7203	0.64	+1.5
22,195	+		GFF7203	0.71	+2.6
22,195	+		GFF7203	0.71	+0.3
22,196	-		GFF7203	0.71	+0.1
22,853	+				+0.7
22,854	-				-1.9
22,854	-				-0.1
22,856	+				-0.3
22,857	-				-0.5
22,857	-				-0.5
23,309	+		GFF7204	0.87	-0.5
23,309	+		GFF7204	0.87	+1.1
23,309	+		GFF7204	0.87	-0.3
23,309	+		GFF7204	0.87	+0.7
23,310	-		GFF7204	0.87	+0.5
23,425	+				-0.1
23,426	-				+0.4
23,426	-				-0.1
23,426	-				-0.5
23,426	-				+0.2
23,426	-				-0.2