Strain Fitness in Variovorax sp. SCN45 around GFF6727

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
36,986	+		GFF6726	0.42	+0.0
36,986	+		GFF6726	0.42	+0.2
36,987	-		GFF6726	0.42	+0.2
37,118	+		GFF6726	0.51	-0.6
37,119	-		GFF6726	0.51	+2.3
37,284	+		GFF6726	0.61	-1.3
37,295	+		GFF6726	0.62	+0.0
37,296	-		GFF6726	0.62	+0.1
37,296	-		GFF6726	0.62	-0.4
37,296	-		GFF6726	0.62	+0.0
37,452	-		GFF6726	0.71	+0.5
37,524	+		GFF6726	0.76	-0.4
37,613	+		GFF6726	0.81	-0.4
37,614	-		GFF6726	0.82	-0.8
37,614	-		GFF6726	0.82	-2.2
37,614	-		GFF6726	0.82	-1.3
38,056	+		GFF6727	0.23	-0.8
38,057	-		GFF6727	0.23	-0.4
38,057	-		GFF6727	0.23	+0.3
38,305	+		GFF6727	0.63	-0.6
38,330	-		GFF6727	0.67	+0.4
38,330	-		GFF6727	0.67	+1.2
38,330	-		GFF6727	0.67	-0.3
38,883	-		GFF6728	0.22	-0.4
39,278	+		GFF6728	0.50	-0.9