Strain Fitness in Variovorax sp. SCN45 around GFF6099

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
115	+		GFF6099	0.36	-2.4
116	-		GFF6099	0.36	+0.7
116	-		GFF6099	0.36	-2.0
132	+		GFF6099	0.41	-0.9
133	-		GFF6099	0.41	-0.9
133	-		GFF6099	0.41	-1.2
133	-		GFF6099	0.41	-1.3
156	+		GFF6099	0.48	+0.2
157	-		GFF6099	0.49	+0.8
428	+		GFF6100	0.25	-0.7
716	+		GFF6100	0.88	-2.0
717	-		GFF6100	0.89	-0.0
717	-		GFF6100	0.89	-0.1
717	-		GFF6100	0.89	-0.2
717	-		GFF6100	0.89	-0.0
863	+				-0.3
863	+				-0.3
864	-				-0.6
864	-				-1.0
864	-				-0.1
1,162	+		GFF6101	0.29	+0.7
1,162	+		GFF6101	0.29	+0.8
1,163	-		GFF6101	0.29	+0.3
1,173	+		GFF6101	0.30	-0.8
1,279	-		GFF6101	0.40	-0.4