Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5635 and GFF5636 are separated by 44 nucleotides GFF5636 and GFF5637 overlap by 4 nucleotides GFF5637 and GFF5638 are separated by 34 nucleotides GFF5638 and GFF5639 overlap by 4 nucleotides GFF5639 and GFF5640 are separated by 123 nucleotides
GFF5635 - Molybdenum ABC transporter permease protein ModB, at 11,470 to 12,153
GFF5635
GFF5636 - Molybdenum ABC transporter, substrate-binding protein ModA, at 12,198 to 12,947
GFF5636
GFF5637 - Molybdenum ABC transporter ATP-binding protein ModC, at 12,944 to 13,732
GFF5637
GFF5638 - no description, at 13,767 to 14,048
GFF5638
GFF5639 - Death on curing protein, Doc toxin, at 14,045 to 14,359
GFF5639
GFF5640 - Putative formate dehydrogenase oxidoreductase protein, at 14,483 to 16,831
GFF5640
Position (kb) 12
13
14 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.182 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.627 kb on + strand, within GFF5636 at 12.628 kb on - strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.718 kb on - strand, within GFF5636 at 12.718 kb on - strand, within GFF5636 at 12.828 kb on + strand, within GFF5636 at 12.828 kb on + strand, within GFF5636 at 12.829 kb on - strand, within GFF5636 at 12.829 kb on - strand, within GFF5636 at 13.040 kb on + strand, within GFF5637 at 13.040 kb on + strand, within GFF5637 at 13.040 kb on + strand, within GFF5637 at 13.139 kb on + strand, within GFF5637 at 13.139 kb on + strand, within GFF5637 at 13.139 kb on + strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.191 kb on - strand, within GFF5637 at 13.191 kb on - strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.226 kb on - strand, within GFF5637 at 13.226 kb on - strand, within GFF5637 at 13.226 kb on - strand, within GFF5637 at 13.580 kb on + strand, within GFF5637 at 13.580 kb on + strand, within GFF5637 at 13.580 kb on + strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.741 kb on + strand at 13.749 kb on - strand at 13.756 kb on - strand at 13.965 kb on + strand, within GFF5638 at 14.051 kb on + strand at 14.051 kb on + strand at 14.051 kb on + strand at 14.052 kb on - strand at 14.052 kb on - strand at 14.052 kb on - strand at 14.052 kb on - strand at 14.163 kb on + strand, within GFF5639 at 14.163 kb on + strand, within GFF5639 at 14.163 kb on + strand, within GFF5639 at 14.164 kb on - strand, within GFF5639 at 14.164 kb on - strand, within GFF5639 at 14.164 kb on - strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.276 kb on + strand, within GFF5639 at 14.277 kb on - strand, within GFF5639 at 14.277 kb on - strand, within GFF5639 at 14.277 kb on - strand, within GFF5639 at 14.277 kb on - strand, within GFF5639 at 14.295 kb on + strand, within GFF5639 at 14.295 kb on + strand, within GFF5639 at 14.295 kb on + strand, within GFF5639 at 14.296 kb on - strand, within GFF5639 at 14.351 kb on + strand at 14.351 kb on + strand at 14.351 kb on + strand at 14.352 kb on - strand at 14.352 kb on - strand at 14.352 kb on - strand at 14.434 kb on + strand at 14.434 kb on + strand at 14.435 kb on - strand at 14.507 kb on + strand at 14.507 kb on + strand at 14.508 kb on - strand at 14.508 kb on - strand at 14.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 12,040 + GFF5635 0.83 -0.4 12,040 + GFF5635 0.83 -0.2 12,040 + GFF5635 0.83 -0.6 12,040 + GFF5635 0.83 -0.8 12,040 + GFF5635 0.83 +0.4 12,040 + GFF5635 0.83 -1.2 12,040 + GFF5635 0.83 -0.2 12,040 + GFF5635 0.83 -1.2 12,040 + GFF5635 0.83 +1.0 12,041 - GFF5635 0.83 -1.9 12,041 - GFF5635 0.83 -0.2 12,041 - GFF5635 0.83 -0.6 12,041 - GFF5635 0.83 -0.1 12,041 - GFF5635 0.83 +0.3 12,041 - GFF5635 0.83 -1.1 12,041 - GFF5635 0.83 -1.1 12,041 - GFF5635 0.83 +0.2 12,041 - GFF5635 0.83 +0.6 12,182 + +0.1 12,184 + +0.5 12,184 + -0.5 12,184 + -1.3 12,184 + +0.0 12,184 + -0.6 12,185 - -0.0 12,185 - -0.2 12,185 - -0.6 12,185 - -0.9 12,185 - +0.9 12,186 + -0.9 12,186 + +0.2 12,186 + -2.6 12,186 + +0.0 12,186 + -0.8 12,187 - -0.3 12,187 - +0.8 12,187 - +0.8 12,187 - -0.5 12,187 - +0.3 12,627 + GFF5636 0.57 +0.2 12,628 - GFF5636 0.57 +0.5 12,717 + GFF5636 0.69 +0.7 12,717 + GFF5636 0.69 -0.6 12,717 + GFF5636 0.69 -0.1 12,717 + GFF5636 0.69 +0.0 12,718 - GFF5636 0.69 +0.4 12,718 - GFF5636 0.69 -2.0 12,828 + GFF5636 0.84 -0.7 12,828 + GFF5636 0.84 +0.0 12,829 - GFF5636 0.84 -0.7 12,829 - GFF5636 0.84 -0.2 13,040 + GFF5637 0.12 -0.3 13,040 + GFF5637 0.12 -0.3 13,040 + GFF5637 0.12 +1.2 13,139 + GFF5637 0.25 -0.6 13,139 + GFF5637 0.25 +0.5 13,139 + GFF5637 0.25 +0.2 13,140 - GFF5637 0.25 +0.8 13,140 - GFF5637 0.25 -1.0 13,140 - GFF5637 0.25 -0.4 13,140 - GFF5637 0.25 -0.7 13,191 - GFF5637 0.31 +1.2 13,191 - GFF5637 0.31 +1.4 13,205 + GFF5637 0.33 -0.2 13,205 + GFF5637 0.33 -0.5 13,205 + GFF5637 0.33 -0.2 13,205 + GFF5637 0.33 -0.7 13,205 + GFF5637 0.33 -0.1 13,205 + GFF5637 0.33 +0.4 13,206 - GFF5637 0.33 +0.7 13,206 - GFF5637 0.33 -0.3 13,206 - GFF5637 0.33 -0.3 13,206 - GFF5637 0.33 -0.2 13,225 + GFF5637 0.36 +0.4 13,225 + GFF5637 0.36 -1.0 13,225 + GFF5637 0.36 -0.9 13,225 + GFF5637 0.36 -0.4 13,226 - GFF5637 0.36 +0.0 13,226 - GFF5637 0.36 +0.2 13,226 - GFF5637 0.36 +0.3 13,580 + GFF5637 0.81 -1.3 13,580 + GFF5637 0.81 -0.2 13,580 + GFF5637 0.81 -1.2 13,581 - GFF5637 0.81 -0.1 13,581 - GFF5637 0.81 -0.3 13,581 - GFF5637 0.81 +0.7 13,581 - GFF5637 0.81 -0.7 13,581 - GFF5637 0.81 +1.0 13,741 + -0.6 13,749 - -1.4 13,756 - -0.4 13,965 + GFF5638 0.70 +1.7 14,051 + -0.7 14,051 + -1.0 14,051 + -0.9 14,052 - +0.2 14,052 - -1.6 14,052 - +0.2 14,052 - +0.5 14,163 + GFF5639 0.37 +0.3 14,163 + GFF5639 0.37 +0.6 14,163 + GFF5639 0.37 -0.2 14,164 - GFF5639 0.38 +0.1 14,164 - GFF5639 0.38 -0.7 14,164 - GFF5639 0.38 -0.2 14,276 + GFF5639 0.73 -0.4 14,276 + GFF5639 0.73 +1.7 14,276 + GFF5639 0.73 +0.4 14,276 + GFF5639 0.73 -0.2 14,276 + GFF5639 0.73 -3.6 14,276 + GFF5639 0.73 -0.4 14,276 + GFF5639 0.73 -0.6 14,277 - GFF5639 0.74 +0.3 14,277 - GFF5639 0.74 +0.6 14,277 - GFF5639 0.74 -0.9 14,277 - GFF5639 0.74 -0.5 14,295 + GFF5639 0.79 -1.0 14,295 + GFF5639 0.79 +3.0 14,295 + GFF5639 0.79 +0.2 14,296 - GFF5639 0.80 +0.5 14,351 + -0.2 14,351 + +0.7 14,351 + -0.8 14,352 - +0.7 14,352 - -0.9 14,352 - -1.1 14,434 + +0.2 14,434 + -0.9 14,435 - +0.4 14,507 + +0.9 14,507 + +0.6 14,508 - +0.9 14,508 - -0.9 14,508 - -1.6
Or see this region's nucleotide sequence