Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5622 and GFF5623 are separated by 85 nucleotides
GFF5622 - Transcriptional regulator, AsnC family, at 74 to 544
GFF5622
GFF5623 - Metal-dependent amidase/aminoacylase/carboxypeptidase, at 630 to 1,817
GFF5623
Position (kb) 0
1 Strain fitness (log2 ratio) -2
-1
0
1 at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.075 kb on + strand at 0.189 kb on + strand, within GFF5622 at 0.189 kb on + strand, within GFF5622 at 0.189 kb on + strand, within GFF5622 at 0.189 kb on + strand, within GFF5622 at 0.189 kb on + strand, within GFF5622 at 0.190 kb on - strand, within GFF5622 at 0.190 kb on - strand, within GFF5622 at 0.190 kb on - strand, within GFF5622 at 0.190 kb on - strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.246 kb on + strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.247 kb on - strand, within GFF5622 at 0.249 kb on + strand, within GFF5622 at 0.249 kb on + strand, within GFF5622 at 0.249 kb on + strand, within GFF5622 at 0.249 kb on + strand, within GFF5622 at 0.249 kb on + strand, within GFF5622 at 0.249 kb on + strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.250 kb on - strand, within GFF5622 at 0.387 kb on + strand, within GFF5622 at 0.602 kb on - strand at 0.618 kb on + strand at 0.618 kb on + strand at 0.618 kb on + strand at 0.619 kb on - strand at 0.619 kb on - strand at 0.619 kb on - strand at 0.619 kb on - strand at 0.619 kb on - strand at 0.619 kb on - strand at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.944 kb on + strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 0.945 kb on - strand, within GFF5623 at 1.101 kb on + strand, within GFF5623 at 1.101 kb on + strand, within GFF5623 at 1.101 kb on + strand, within GFF5623 at 1.102 kb on - strand, within GFF5623 at 1.102 kb on - strand, within GFF5623 at 1.102 kb on - strand, within GFF5623 at 1.102 kb on - strand, within GFF5623 at 1.102 kb on - strand, within GFF5623 at 1.102 kb on - strand, within GFF5623 at 1.404 kb on + strand, within GFF5623 at 1.404 kb on + strand, within GFF5623 at 1.404 kb on + strand, within GFF5623 at 1.404 kb on + strand, within GFF5623 at 1.405 kb on - strand, within GFF5623 at 1.405 kb on - strand, within GFF5623 at 1.497 kb on + strand, within GFF5623 at 1.497 kb on + strand, within GFF5623 at 1.497 kb on + strand, within GFF5623 at 1.497 kb on + strand, within GFF5623 at 1.497 kb on + strand, within GFF5623 at 1.498 kb on - strand, within GFF5623 at 1.498 kb on - strand, within GFF5623 at 1.498 kb on - strand, within GFF5623 at 1.498 kb on - strand, within GFF5623 at 1.498 kb on - strand, within GFF5623 at 1.498 kb on - strand, within GFF5623 at 1.498 kb on - strand, within GFF5623
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 75 + +0.1 75 + -0.8 75 + -0.1 75 + +1.1 75 + -0.5 75 + -1.7 75 + -0.9 75 + -0.6 75 + -0.5 75 + -0.6 75 + -1.1 75 + +0.0 75 + -0.1 189 + GFF5622 0.24 -1.3 189 + GFF5622 0.24 -2.3 189 + GFF5622 0.24 +0.3 189 + GFF5622 0.24 +0.1 189 + GFF5622 0.24 +0.1 190 - GFF5622 0.25 +0.1 190 - GFF5622 0.25 -0.7 190 - GFF5622 0.25 -2.0 190 - GFF5622 0.25 +1.4 246 + GFF5622 0.37 -0.6 246 + GFF5622 0.37 -0.2 246 + GFF5622 0.37 -0.1 246 + GFF5622 0.37 +0.3 246 + GFF5622 0.37 -1.2 246 + GFF5622 0.37 -0.0 246 + GFF5622 0.37 +0.5 246 + GFF5622 0.37 -0.3 247 - GFF5622 0.37 -1.7 247 - GFF5622 0.37 +0.5 247 - GFF5622 0.37 -0.7 247 - GFF5622 0.37 +0.5 247 - GFF5622 0.37 -0.4 247 - GFF5622 0.37 +0.2 247 - GFF5622 0.37 -0.3 247 - GFF5622 0.37 -0.3 247 - GFF5622 0.37 +0.5 247 - GFF5622 0.37 -0.4 247 - GFF5622 0.37 -0.4 247 - GFF5622 0.37 +1.7 247 - GFF5622 0.37 -0.0 249 + GFF5622 0.37 -2.1 249 + GFF5622 0.37 +1.7 249 + GFF5622 0.37 -0.6 249 + GFF5622 0.37 +0.1 249 + GFF5622 0.37 -0.7 249 + GFF5622 0.37 -0.4 250 - GFF5622 0.37 +0.1 250 - GFF5622 0.37 -0.5 250 - GFF5622 0.37 +1.0 250 - GFF5622 0.37 -0.6 250 - GFF5622 0.37 -1.3 250 - GFF5622 0.37 -0.6 250 - GFF5622 0.37 +0.1 250 - GFF5622 0.37 +0.1 387 + GFF5622 0.66 -0.9 602 - -0.7 618 + +0.5 618 + -0.5 618 + -0.2 619 - +0.6 619 - -0.6 619 - +0.3 619 - -0.3 619 - +0.5 619 - -0.9 944 + GFF5623 0.26 -0.7 944 + GFF5623 0.26 -0.3 944 + GFF5623 0.26 -0.8 944 + GFF5623 0.26 -0.4 944 + GFF5623 0.26 +0.7 944 + GFF5623 0.26 +1.3 944 + GFF5623 0.26 +0.6 944 + GFF5623 0.26 +0.0 944 + GFF5623 0.26 -0.1 944 + GFF5623 0.26 -1.0 944 + GFF5623 0.26 -1.1 944 + GFF5623 0.26 -0.6 944 + GFF5623 0.26 -0.7 944 + GFF5623 0.26 -0.2 944 + GFF5623 0.26 -0.5 944 + GFF5623 0.26 -0.9 944 + GFF5623 0.26 -0.3 944 + GFF5623 0.26 -0.5 944 + GFF5623 0.26 -0.9 944 + GFF5623 0.26 -0.5 945 - GFF5623 0.27 -1.2 945 - GFF5623 0.27 -0.7 945 - GFF5623 0.27 +0.2 945 - GFF5623 0.27 -0.6 945 - GFF5623 0.27 -0.8 945 - GFF5623 0.27 -1.4 945 - GFF5623 0.27 -2.0 945 - GFF5623 0.27 -0.5 945 - GFF5623 0.27 -1.5 945 - GFF5623 0.27 -0.0 945 - GFF5623 0.27 +0.1 945 - GFF5623 0.27 -0.6 1,101 + GFF5623 0.40 -0.5 1,101 + GFF5623 0.40 -1.2 1,101 + GFF5623 0.40 +0.1 1,102 - GFF5623 0.40 -0.6 1,102 - GFF5623 0.40 -1.7 1,102 - GFF5623 0.40 +1.0 1,102 - GFF5623 0.40 -0.6 1,102 - GFF5623 0.40 -0.1 1,102 - GFF5623 0.40 -0.3 1,404 + GFF5623 0.65 +0.6 1,404 + GFF5623 0.65 +0.1 1,404 + GFF5623 0.65 -0.5 1,404 + GFF5623 0.65 +0.9 1,405 - GFF5623 0.65 -0.9 1,405 - GFF5623 0.65 -0.9 1,497 + GFF5623 0.73 +0.3 1,497 + GFF5623 0.73 +0.5 1,497 + GFF5623 0.73 -0.3 1,497 + GFF5623 0.73 -0.2 1,497 + GFF5623 0.73 -1.3 1,498 - GFF5623 0.73 +0.3 1,498 - GFF5623 0.73 -0.5 1,498 - GFF5623 0.73 -0.9 1,498 - GFF5623 0.73 -0.2 1,498 - GFF5623 0.73 -0.9 1,498 - GFF5623 0.73 +0.2 1,498 - GFF5623 0.73 +0.8
Or see this region's nucleotide sequence