Strain Fitness in Variovorax sp. SCN45 around GFF4283

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
202,473	+		GFF4282	0.57	-0.4
202,474	-		GFF4282	0.57	-0.7
202,480	+		GFF4282	0.58	+0.3
202,511	+		GFF4282	0.61	+1.1
202,900	+				+0.1
202,901	-				-0.3
203,331	+				+1.7
203,331	+				+0.5
203,331	+				+0.2
203,408	-				-1.7
203,426	+				-1.3
203,523	+		GFF4283	0.45	+0.4
203,524	-		GFF4283	0.46	+0.2
203,536	-		GFF4283	0.53	+0.5
203,536	-		GFF4283	0.53	+1.4
203,592	+		GFF4283	0.85	-0.4
203,593	-		GFF4283	0.86	-1.3
204,045	+		GFF4284	0.21	+0.2
204,046	-		GFF4284	0.21	+0.1
204,603	+		GFF4284	0.56	+0.0
204,604	-		GFF4284	0.56	+0.0