Strain Fitness in Variovorax sp. SCN45 around GFF4144

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
50,294	-				+0.3
50,329	+		GFF4142	0.14	-0.8
50,336	-		GFF4142	0.16	-1.3
50,519	-		GFF4142	0.68	+1.7
50,603	-				-0.1
50,603	-				-0.3
50,633	-				+0.3
50,759	-		GFF4143	0.16	+0.7
51,142	-		GFF4143	0.83	+0.7
51,142	-		GFF4143	0.83	+0.1
51,460	+		GFF4144	0.42	-0.6
51,460	+		GFF4144	0.42	-0.8
51,460	+		GFF4144	0.42	-1.3
51,460	+		GFF4144	0.42	-0.2
51,460	+		GFF4144	0.42	+1.5
51,461	-		GFF4144	0.42	-1.3
51,461	-		GFF4144	0.42	-0.3
51,625	+		GFF4144	0.84	+0.5
51,625	+		GFF4144	0.84	+0.3
51,625	+		GFF4144	0.84	+1.3
51,626	-		GFF4144	0.84	+0.2
51,734	-				+0.2
51,734	-				-0.9
51,982	-		GFF4145	0.24	+0.5