Strain Fitness in Variovorax sp. SCN45 around GFF4113

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
16,373	-		GFF4112	0.82	-0.2
16,713	-				+0.4
16,862	-				-0.1
16,862	-				-0.0
16,862	-				-0.4
17,452	+		GFF4113	0.47	-0.9
17,452	+		GFF4113	0.47	+0.3
17,452	+		GFF4113	0.47	-1.1
17,503	+		GFF4113	0.51	-1.0
17,681	-		GFF4113	0.64	+0.7
17,897	-		GFF4113	0.80	-0.5
18,224	+				-0.1
18,954	+		GFF4114	0.38	+1.7
18,955	-		GFF4114	0.38	-0.3
19,018	+		GFF4114	0.41	+0.5