Strain Fitness in Variovorax sp. SCN45 around GFF1931

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
612,340	-		GFF1930	0.83	+0.1
612,340	-		GFF1930	0.83	+1.2
612,648	+				-1.3
612,816	-				-0.6
613,647	-		GFF1931	0.62	-0.0
613,818	+		GFF1931	0.74	+0.4
613,818	+		GFF1931	0.74	+0.5
614,089	+				+1.3
614,228	+				+0.5
614,229	-				+1.0
614,291	+		GFF1932	0.11	+0.8
614,292	-		GFF1932	0.11	-0.4
614,578	+		GFF1932	0.48	-0.2
614,653	+		GFF1932	0.57	-0.3
614,790	+		GFF1932	0.75	+0.4
614,898	-		GFF1932	0.88	+1.2
614,987	-				+0.8
615,185	-				-0.0
615,185	-				-1.3
615,185	-				-1.3