Strain Fitness in Escherichia coli ECRC62 around BNILDI_05980

Experiment: JK36

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK36
1,189,387	+				-0.3
1,189,390	+				-0.9
1,189,391	-				-0.6
1,189,472	-				+0.1
1,189,512	-	yjaZ	BNILDI_05970	0.17	+1.4
1,189,542	+	yjaZ	BNILDI_05970	0.22	+2.0
1,189,548	-	yjaZ	BNILDI_05970	0.24	-0.3
1,189,565	+	yjaZ	BNILDI_05970	0.27	+2.6
1,189,566	-	yjaZ	BNILDI_05970	0.27	+1.4
1,189,626	+	yjaZ	BNILDI_05970	0.38	-0.3
1,189,631	+	yjaZ	BNILDI_05970	0.39	-1.1
1,189,632	-	yjaZ	BNILDI_05970	0.39	+0.7
1,189,676	-	yjaZ	BNILDI_05970	0.47	-1.7
1,189,680	+	yjaZ	BNILDI_05970	0.48	-1.3
1,189,695	+	yjaZ	BNILDI_05970	0.51	+0.7
1,189,706	-	yjaZ	BNILDI_05970	0.53	-0.8
1,189,754	+	yjaZ	BNILDI_05970	0.62	+0.4
1,189,754	+	yjaZ	BNILDI_05970	0.62	+2.8
1,189,754	+	yjaZ	BNILDI_05970	0.62	-1.0
1,189,776	+	yjaZ	BNILDI_05970	0.66	+0.7
1,189,790	-	yjaZ	BNILDI_05970	0.68	+0.8
1,189,851	+	yjaZ	BNILDI_05970	0.80	+1.3
1,189,933	+				+1.8
1,189,997	-				+0.3
1,190,141	+				+0.7
1,190,142	-				+1.0
1,190,145	+				-1.3
1,190,153	+				-0.0
1,190,154	-				+0.5
1,190,359	+				-0.6
1,190,360	-				-1.0
1,190,373	+				-0.3
1,190,664	+	thiH	BNILDI_05980	0.26	-0.3
1,190,741	-	thiH	BNILDI_05980	0.33	-0.3
1,190,741	-	thiH	BNILDI_05980	0.33	+2.9
1,190,792	+	thiH	BNILDI_05980	0.37	-0.5
1,190,793	-	thiH	BNILDI_05980	0.37	-0.9
1,190,793	-	thiH	BNILDI_05980	0.37	+0.2
1,190,794	+	thiH	BNILDI_05980	0.37	-0.1
1,190,794	+	thiH	BNILDI_05980	0.37	+1.6
1,190,794	+	thiH	BNILDI_05980	0.37	+1.2
1,190,795	-	thiH	BNILDI_05980	0.37	+0.9
1,190,795	-	thiH	BNILDI_05980	0.37	-0.4
1,190,795	-	thiH	BNILDI_05980	0.37	+2.0
1,190,844	+	thiH	BNILDI_05980	0.42	+0.1
1,190,845	-	thiH	BNILDI_05980	0.42	+0.1
1,190,849	+	thiH	BNILDI_05980	0.42	-0.3
1,190,950	+	thiH	BNILDI_05980	0.51	+0.1
1,190,994	+	thiH	BNILDI_05980	0.55	+0.1
1,190,995	-	thiH	BNILDI_05980	0.55	-0.6
1,190,995	-	thiH	BNILDI_05980	0.55	+0.3
1,191,005	-	thiH	BNILDI_05980	0.56	-0.3
1,191,123	+	thiH	BNILDI_05980	0.66	-0.8
1,191,124	-	thiH	BNILDI_05980	0.66	+0.4
1,191,126	+	thiH	BNILDI_05980	0.67	+0.4
1,191,126	+	thiH	BNILDI_05980	0.67	-0.3
1,191,232	+	thiH	BNILDI_05980	0.76	+0.6
1,191,266	-	thiH	BNILDI_05980	0.79	+1.0
1,191,277	+	thiH	BNILDI_05980	0.80	-0.7
1,191,278	-	thiH	BNILDI_05980	0.80	-0.7
1,191,284	+	thiH	BNILDI_05980	0.81	+0.1
1,191,284	+	thiH	BNILDI_05980	0.81	+0.6
1,191,284	+	thiH	BNILDI_05980	0.81	+3.4
1,191,380	+	thiH	BNILDI_05980	0.89	+0.5
1,191,408	+				+0.7
1,191,420	+				+1.9
1,191,447	-				-0.8
1,191,763	+	thiG	BNILDI_05985	0.34	+1.1
1,191,763	+	thiG	BNILDI_05985	0.34	-0.5
1,191,859	+	thiG	BNILDI_05985	0.47	-0.6
1,191,885	+	thiG	BNILDI_05985	0.50	-1.3
1,192,066	+	thiG	BNILDI_05985	0.73	-0.2
1,192,067	-	thiG	BNILDI_05985	0.74	-2.3
1,192,262	-				+2.6
1,192,325	+	thiF	BNILDI_05990	0.26	+2.1
1,192,326	-	thiF	BNILDI_05990	0.27	+0.4
1,192,365	-	thiF	BNILDI_05990	0.46	+0.1
1,192,411	-	thiF	BNILDI_05990	0.69	-1.4
1,192,411	-	thiF	BNILDI_05990	0.69	-1.4