Strain Fitness in Variovorax sp. SCN45 around GFF6360

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
24,379	+		GFF6358	0.49	+0.5
24,721	+				-0.6
24,721	+				-0.0
24,722	-				-0.9
24,833	+				-1.2
24,834	-				-0.7
24,834	-				-0.1
25,071	+		GFF6359	0.66	-0.6
25,071	+		GFF6359	0.66	+0.0
25,071	+		GFF6359	0.66	+0.7
25,071	+		GFF6359	0.66	-0.3
25,072	-		GFF6359	0.66	-2.2
25,072	-		GFF6359	0.66	-1.6
25,072	-		GFF6359	0.66	-1.5
25,072	-		GFF6359	0.66	-1.7
25,072	-		GFF6359	0.66	-0.3
25,072	-		GFF6359	0.66	+0.4
25,151	+		GFF6359	0.87	+0.3
25,556	-		GFF6360	0.51	-0.9
25,590	+		GFF6360	0.56	-0.7